Vibrio neocaledonicus: D3H41_05490
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Entry
D3H41_05490 CDS
T06228
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl01501
beta-Lactam resistance
vnl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3H41_05490
01503 Cationic antimicrobial peptide (CAMP) resistance
D3H41_05490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vnl03036
]
D3H41_05490
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_05490
01504 Antimicrobial resistance genes [BR:
vnl01504
]
D3H41_05490
Chromosome and associated proteins [BR:
vnl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D3H41_05490
Transporters [BR:
vnl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D3H41_05490
Antimicrobial resistance genes [BR:
vnl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D3H41_05490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
DUF1344
HAUS4
Hia_Tpr_ring_dom
MalQ_N
Sos7
Motif
Other DBs
NCBI-ProteinID:
QCO85570
LinkDB
All DBs
Position
1:1130756..1131895
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AA seq
379 aa
AA seq
DB search
MRRKTTLSLLIASSLFVVGCQPSEEGSSQGGGPAPVTEVEVLTVQPTRQALTVELPGRSR
AFKEAEVRPQVTGIISERNFVEGGLVEQGQSLYQIDDSSFQADLLSAEAELIRAQAAAES
TYATVKRYRTLITKKSISQQDLDEAEAAYKEAKAQVLVAKAKINTAKINLDYTQVKAPIS
GVIGKSSVTAGALVTANQAAKLATIQQLDPINVDIVQSSAQLLRLKASLSQGHMQEDDSA
QVTLMLEDGSTYEHKGTMKFTEVNVNESTGSVTLRAEFPNPDGLLLPGMFVRATVITGVD
PDAILIPQNTVSRDATGKATVMTVNGENKVEAKPVKTAEAINSQWRIIDGLNAGDKVITA
GLQKVGPGSSVTIQNGEQE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtaaaaccacgctatctctgctgattgcgtcgagcctttttgtggttggatgt
caacctagcgaagaaggatcgagccaaggtggtgggcctgcgcccgtaaccgaagtagaa
gtgttaacagtgcagccaacgcgccaagcattgacagtagagttgccgggtcgtagcaga
gcattcaaagaagcagaagttcgtccgcaagtcactggcattatttcggagcgaaatttt
gttgaaggtggccttgttgaacaaggacagtcgctatatcaaattgatgattcatcattt
caggcggatttgctgagcgctgaagcggaattaatccgtgcgcaagctgcggcagagtcg
acctatgccacggtgaagcgttacagaaccttgatcaccaaaaaatccatcagccaacaa
gacttggatgaagcagaagcggcatacaaagaagcgaaagcgcaggtcctagtcgcaaaa
gccaagatcaacacagcaaaaatcaacttagattatacgcaagtcaaagctccgattagc
ggggtgatcggtaaatcgagtgtgacagcgggtgcgttggttacggctaaccaagctgcc
aaattagcgaccattcagcagcttgaccctatcaatgttgatattgtgcaatcatccgcg
caactgctgcgtttgaaagcatcactctcccaaggccatatgcaagaagatgactctgcg
caagttacattgatgcttgaagatggcagcacttacgaacacaaaggcacaatgaaattt
actgaggtcaatgtgaacgaaagtacgggcagcgtgacgcttcgtgccgaattcccaaac
cctgacggtttgttgctacctggaatgtttgttcgtgcgacggtcattactggtgtcgac
cctgatgcgattctaataccacaaaatacggtatctcgtgatgcgacaggtaaagcgaca
gtgatgacggttaatggcgagaacaaagtggaagcgaaaccagtgaagactgccgaagcg
atcaatagccaatggcgcattattgatggtttgaacgcgggtgataaagtcattaccgcc
ggtttacaaaaggtagggccaggcagttcggtaactatccaaaacggtgaacaggagtaa
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