Vibrio neocaledonicus: D3H41_08575
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Entry
D3H41_08575 CDS
T06228
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_08575
01504 Antimicrobial resistance genes [BR:
vnl01504
]
D3H41_08575
Transporters [BR:
vnl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D3H41_08575
Antimicrobial resistance genes [BR:
vnl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
D3H41_08575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QCO86147
LinkDB
All DBs
Position
1:1811915..1815055
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AA seq
1046 aa
AA seq
DB search
MKFAHFFIQRPIFASMLSLLILIVGAISLLQLPVSEYPEVVPPTVVVTANYPGANPKVIA
ETVATPLEQEINGTENMLYMFSQATSDGRMTLTVTFALGTDLDKAQVQIQNRVTTALPRL
PEAVQRLGVVAEKASPDLTMVVHIYSPDSSREVSYLANYANLNLKDEIARLGGVGDVRLF
GGDEYSMRLWLNPDELASRNLTVMDVVSAVRSQNQQVAAGSLGAQPAANENQFQVLLNVK
GRLENIDEFNDIVVKVDETGALTRLKDVARVELGQNSYALRALLNGKPAVAMPVFQRPGA
NAIELSNQVRSTMDRLQAAFPAGVSYEIAYDPTVFVRGSIDAVVHTLLEAIVLVVVVVIL
FLQTWRASIIPIIAVPVSLIGTFAVMQMLGVSINTLSLFGLVLAIGIVVDDAIVVVENVE
RNIHNGLAPLEATKQAMTEVTGPIIAIALVLCAVFIPTTFITGLSGQFYKQFALTITIST
IISAINSLTLSPALSALLLQDKNAKPDRLTKLLDAVFGKYVFAPFNRIFEYSSNQYQALV
KKLIRFSLVVVVVYIALLGGTVSLFKAVPGGFIPQQDKQYLVAIAQLPDAASLDRTESVI
KEMENLALATPGVAQTISFPGLSVNGFTNSPNSGIVFVTLEDFDKRNDPTLGANAIVASL
NKSFSIIDEAFVAIFPPPPIQGLGSTGGFKLQIEDRANKGFDELFKQLNLVISEASTRPE
LMGLYSTFRIQVPQMDIQIDREQAMLQGVPLEQVFDALQVYLGSLYVNDFNMFGRTYKVN
AQADMNYRLEPDQILNYKVRNAAGQMVPLGAVLEIIPTIGPDRVMHYNGYPSAELNGSPA
FGYSSDQAQTAIEEVLDQNLAEGMVYEWTDVTYQQILAGNTMVYIFPLVVLLVFMVLASQ
YESLKLPFAIILIVPMTIFSALAGVWFIGGDNNIFTQIALIVLVALACKNAILMVEFAKE
LKDNGQDTLSAILEACRLRLRPILMTSIAFTAGVIPLMIGTGAGAEMRQAMGIAVFSGMV
GVTVFGLLLTPVFYMLVSRNKKRQTL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcacacttttttattcaaagacccatatttgcctctatgttatcgctattg
atattaatagtaggcgcaatttcacttttacagttgcctgtgagtgaatatccagaggtt
gtccctcctacagtggtagttacagcaaactatcctggtgcgaacccaaaagtaatcgca
gaaacagttgctacgcctctggagcaagaaattaatggtacagaaaacatgttatatatg
ttttcgcaggcaaccagtgacggcagaatgacattgaccgtaacctttgctttaggtacg
gacttggacaaagctcaggttcaaattcaaaaccgcgtcactacagctttgccccgatta
ccagaagccgtccaacggttaggagttgttgccgaaaaagcctctcctgatctcactatg
gttgtgcatatatattctccagattctagccgtgaagtcagttatttagctaactacgct
aatttaaacttgaaagatgagatagctcggctcggaggcgttggtgatgtgcgccttttc
ggtggtgacgagtactcaatgcgcttgtggttaaatccagatgagctcgcttctagaaat
ctaaccgtaatggacgttgtctccgccgtccgatctcaaaaccaacaggtggcagcaggc
tcattaggtgcgcaaccagccgctaatgaaaaccaattccaagttttgttgaacgtaaaa
ggccgcttggagaatattgatgaattcaacgacattgtagtaaaagttgacgaaacaggg
gctttgacacgtcttaaagacgttgcacgcgtagagctaggtcaaaactcttatgcactg
cgcgccttgttaaatggtaaaccagcggtggcgatgcccgtattccagcgccctggtgct
aatgctattgagctatcgaatcaggttcgctcaaccatggaccgtttacaagcagccttt
ccagctggagtttcatatgaaatagcctacgacccgaccgtctttgttcgtggatcgata
gacgcagtggttcatactctgctagaggcaattgtactagttgttgttgtagtcattttg
tttttgcaaacatggcgcgcgtctatcatccctatcattgcggtgcctgtttcattaatc
ggtacgttcgccgtaatgcaaatgctcggagtatcgattaacacgctttcgttgtttgga
cttgttctcgccataggcatcgtcgtcgatgacgccattgtcgtcgtcgaaaacgtggaa
cggaacatccataatggccttgcaccactagaagcaacgaaacaagcaatgaccgaagtt
accgggccaattattgcaattgctttagtgttatgtgcggtgttcatcccgacgaccttt
attacagggttatccggtcagttttataagcagttcgcactaacaattacgatctcgacg
attatttcagcaattaactcgttgacgttatcgcctgctttatcagcactgctattacaa
gataagaacgcaaaacccgatcggctaaccaagctcttggatgcggtttttggtaagtat
gtttttgcgccattcaatagaatttttgagtatagctcgaaccaatatcaagctctggtc
aagaagctgattcgttttagccttgttgttgtggtggtatacattgcgttactcggggga
acggtttctctattcaaagcggttcctggaggattcattcctcaacaagataagcagtat
ttagttgcgatcgcccaacttccagatgcagcaagtttagatagaacagagtccgttatt
aaagaaatggaaaacctcgcgctggcaacacctggcgtagcacaaaccatttctttccca
ggcttatcggtcaatggttttactaacagtccgaatagtggcatcgtttttgttacgctt
gaggacttcgataaacgaaatgatccaactctcggagcaaatgcgattgttgcatctttg
aataagagcttttcaatcattgatgaagccttcgttgcgatttttccaccaccaccaatc
caaggacttggctctactggcggctttaaacttcaaatcgaagaccgtgcgaacaagggg
tttgatgagctcttcaagcaattgaacttggtaataagtgaggcatcaacaagacccgag
ctgatgggattatattccacatttcgtatacaagtgccgcagatggacatccaaatagat
cgtgaacaagcgatgctgcaaggtgttcctctagagcaggtttttgatgcgcttcaagtt
tatttaggatcattatacgtcaatgacttcaatatgtttggtagaacatacaaagtgaat
gcccaggcagacatgaactatcgtctcgaacctgaccaaatacttaactacaaagtaaga
aatgctgccggacaaatggttcctctcggcgctgtactggagatcatacccacgattggg
cctgaccgcgtgatgcactataacggctaccctagtgcagaactaaacggcagtcctgct
tttggttacagttcagatcaagcccaaacggctattgaggaagtactggatcaaaaccta
gcagagggaatggtttatgaatggactgatgtaacctaccagcagattttggctggtaac
acgatggtgtatatattcccacttgttgtcttgttagttttcatggtgctagcttcgcag
tacgagagtttaaaactgccattcgctatcattttgatcgttcctatgaccattttttct
gcactagcaggtgtttggttcattggtggtgacaacaatatattcacacaaattgctttg
attgtccttgtggctctagcgtgtaaaaatgccatcttgatggtggagttcgctaaagaa
cttaaagacaatggccaagataccttatcagcgattttggaagcatgtcgtttacgtctt
cgaccgattctaatgacatcaattgcatttaccgctggtgttattccattaatgattggt
acaggggccggagcggaaatgcgacaagcaatgggtattgccgtattctcgggtatggta
ggcgtaacggtatttggattactactcacacctgttttttacatgttagtgagtcgaaac
aaaaaacgtcaaacactataa
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