Vibrio navarrensis: IF132_00055
Help
Entry
IF132_00055 CDS
T07785
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
vnv
Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vnv03009
]
IF132_00055 (rlmC)
Enzymes [BR:
vnv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
IF132_00055 (rlmC)
Ribosome biogenesis [BR:
vnv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IF132_00055 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_ANTKMT
Methyltransf_32
Methyltransf_12
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_37
Methyltransf_4
PNMA_C
N6_N4_Mtase
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QOD68436
LinkDB
All DBs
Position
2:complement(13846..14979)
Genome browser
AA seq
377 aa
AA seq
DB search
MPCEFFQQKRCTSCTYIEMPYLAQIEMKDVHLRQLFPQVSTSAWLAPVQSQPTQCRNKAK
MVVLGAAHQPILGIESVQDGSPVSLTTCPLYQDVMRELLSYLQNWIRIAGIPPYNKVKKK
GELKFILLTQSQKRGEFMLRFVLRSENALQRIRDNLPRLQQDFPAIRVITANIQPVHMAR
LEGEQEIFLSDAQYLLEEFNGVPMVIKPKSFFQTNPDVAAKLYATARDWVAEIQPQTMWD
LFCGVGGFALHCAQHAQAVVGIEIEEEAINSAKLSASQLGIENLSFAALDSGEYSRSQTQ
SPDLILVNPPRRGLGKALTDQLECLAAKHLIYSSCNPNTLQADLANLTSYQVVRAQWFDM
FPHTDHAEVMMLLKRSD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgtgaatttttccagcagaagcgctgcacttcctgcacttacatcgagatgcct
tatctggcacaaatcgaaatgaaagacgtccatttgcgccagctctttcctcaggtgtcc
acttcggcgtggcttgcgcctgtgcaaagccagcccacccaatgccgcaacaaagcgaaa
atggtcgttttgggcgctgcacatcagccgattttgggcatcgagagcgtgcaagatggt
tcgccagtgtctctcaccacttgtccactttatcaggacgtgatgcgcgagctgctgagc
tatttgcagaactggatccgcatcgcgggtattccgccttacaacaaagtgaagaaaaaa
ggcgaactgaagtttattttgctcacgcaaagccaaaaacgtggcgagtttatgttgcgt
tttgtgctgcgtagcgaaaatgcactgcaacgcattcgtgacaatttgccccgtttacag
caagattttccagcgattcgcgtgattaccgccaacatccaaccggtacacatggcgcgg
ctagagggagagcaagagattttcctctcagacgcgcaatatctgttggaggagtttaac
ggcgtgccgatggtgattaagcccaaaagtttttttcaaaccaaccccgatgtcgcggca
aaactgtatgcgacggcgcgagactgggtcgcagagatccaaccgcaaaccatgtgggat
ctgttttgtggcgtaggcggttttgccctgcactgcgcgcagcatgcgcaagcggtcgtg
ggtattgaaatagaagaagaggcgatcaacagcgccaagctgtccgccagccagctaggt
attgagaacttgagctttgctgcattagattctggcgaatactcgcgctcgcaaacacaa
tcaccggatctgatcttggtcaacccgccgaggcgcgggcttggcaaagcactgactgat
cagttggaatgcttggcagctaagcacctcatttattcgagttgtaacccgaatactctg
caagcggatttggcaaacttgactagctatcaggtggttcgcgcccaatggtttgatatg
ttccctcataccgatcacgctgaagtgatgatgttacttaagcgcagcgactga
DBGET
integrated database retrieval system
