Vibrio navarrensis: IF132_04180
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Entry
IF132_04180 CDS
T07785
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vnv
Vibrio navarrensis
Pathway
vnv01501
beta-Lactam resistance
vnv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IF132_04180
01503 Cationic antimicrobial peptide (CAMP) resistance
IF132_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vnv03036
]
IF132_04180
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnv02000
]
IF132_04180
01504 Antimicrobial resistance genes [BR:
vnv01504
]
IF132_04180
Chromosome and associated proteins [BR:
vnv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IF132_04180
Transporters [BR:
vnv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IF132_04180
Antimicrobial resistance genes [BR:
vnv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IF132_04180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_MFP_RND
BSH_RND
BSH_CusB
YknX_C
Biotin_lipoyl
RND-MFP_C
HH_AprE
BSH_YhbJ
CzcB_C
BSH_YknX
Beta-barrel_RND_2
BSH_CzcB
Myosin_tail_1
QSregVF
DUF6373
BSH_LcnD
MauJ_N
Motif
Other DBs
NCBI-ProteinID:
QOD67639
LinkDB
All DBs
Position
2:complement(974434..975438)
Genome browser
AA seq
334 aa
AA seq
DB search
MQWLKKSALAAALLLTTNSSAMADVYTAQLTKVDQAIVLDGVVQPVNQGTVAAQTSGTVV
ALNVDVNDYVKQGSVLLEISAVQQSAALDAAKAQLASAVAQNKEAQAQVKRFRQLMPKGA
ISQDQMDAAETRARSAAAAVKSVEASVAQAKESLGYTSVTAPYDGVVTKRYVELGETVAP
GTPLLSGFSMDELRVESEIPQHYYSLVNNEAQFTIDNGGGEKVTPTTYNLFRYAEPSSHS
HTIRLNLPEKQLGFTPGAWVKTRFVYGQRELLLVPKTAVMRRAELSVVYRLTKDDEAILN
PVRLGQEFEDSYEVLSGLEIGDRVVSNLLKVKGE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggttgaaaaagtctgcgttggcagccgcacttttgctcacaacgaacagctcg
gcaatggcggatgtctataccgcgcagctcactaaagtcgatcaggccatcgtgttggat
ggtgtggttcagcctgtcaatcaaggtactgtcgccgcgcaaacgtcaggtaccgtggtc
gccctcaatgtggatgtgaatgattacgttaagcaaggtagtgtgctattggaaattagt
gcagtacaacaatcggccgcgctagatgcagccaaggcgcaattggcaagcgcagttgca
caaaataaagaagcgcaggcacaagtaaagcgttttcgccaattgatgccgaaaggggcg
atttcccaagatcagatggatgcagcagaaacgcgtgctcgcagcgctgctgccgcagtc
aaatcggtggaggcatcggtagcacaggcaaaagagtctctcggttacaccagcgtgacg
gcaccttatgatggtgtggtgactaagcgttatgtcgaactgggggaaaccgtggccccg
ggcacaccactgttgagcggtttctcgatggacgagctcagagtggaaagtgagatcccg
cagcactattactcgctggtaaacaatgaagcgcagtttacgattgacaatggcggtggc
gagaaagtcactccaaccacctacaatcttttccgttatgcagaacctagctcacacagc
catactattcgccttaacttaccggaaaagcaacttggttttaccccaggtgcttgggtg
aaaacgcgttttgtctatgggcagagagaactcctgctggtccccaaaacggccgtcatg
cgtcgcgctgaactgagcgtcgtctaccgactcactaaagacgatgaggcaatccttaat
ccggtacgcctagggcaagagtttgaggacagctatgaagtgttgtctggacttgaaatt
ggcgatcgtgtggtaagcaatttgctcaaagtgaaaggtgaataa
DBGET
integrated database retrieval system
