Vibrio navarrensis: IF132_12875
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Entry
IF132_12875 CDS
T07785
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00540
Lipopolysaccharide biosynthesis
vnv01100
Metabolic pathways
Module
vnv_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IF132_12875 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vnv01005
]
IF132_12875 (lpxC)
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
IF132_12875 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
vnv01005
]
Lipid A
IF132_12875 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QOD69661
LinkDB
All DBs
Position
1:complement(1340031..1340948)
Genome browser
AA seq
305 aa
AA seq
DB search
MIRQRTLKEMVKTTGVGLHSGRKVTLTLRPAAANTGIIYRRTDLNPPVDFPADPASVRDT
MLCTALVSDDGVRISTVEHLNAALAGMGIDNVIVEVDAPEIPIMDGSASPFVYLLQQAGI
EFQNAAKRFIRIKKPVRFEDGDKWAEFVPFNGFRMDFEIDFNHPAIESDEQRLLFDFSSQ
GFVREISRARTFGFMRDIEYLQSQNLVLGGSFDNAIVLDDYRILNEEGLRFENEFVTHKV
LDAIGDLYMCGHAIIGEFRAYKSGHGLNNQLLRAVLADQEAWEWTTFEEEAGSPVAFAEP
NMVFA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacaacgtactctgaaggaaatggtgaaaacaactggtgtgggcctccactct
ggtcgtaaagtcacattgactcttcgccctgccgctgcaaataccggtattatttatcgt
cgtacggatctgaatccgccagtcgattttccagcagatccggcttcggtccgtgacact
atgctgtgtaccgcacttgtgagcgatgacggtgttcgcatatccactgttgagcatcta
aacgccgcactggcgggtatgggcatcgacaatgtgatcgttgaagtcgacgcacctgaa
atccccattatggatggcagcgcaagcccatttgtttatctgctccagcaagcgggtatt
gaattccaaaatgcggcaaagcgttttattcgaatcaagaaacctgtacgtttcgaagat
ggcgataaatgggctgagtttgtcccatttaatggcttccgcatggattttgagatcgac
tttaaccatccagccattgagtctgacgagcaacgtttgttgtttgatttctcttcgcaa
ggttttgtacgtgaaatttctcgtgctcgtaccttcggctttatgcgtgacattgagtac
cttcaatcgcaaaacctcgtcttgggtggcagttttgataacgctatcgtactggatgat
taccgtatcctaaacgaagaaggcttgcgttttgagaatgagtttgtgactcacaaagtt
ctggacgcgattggcgatctttacatgtgtggtcatgcgattattggtgagttccgcgcc
tacaaatcagggcacggtttaaacaaccaactattacgtgcagtactggcagatcaagaa
gcgtgggaatggactaccttcgaagaagaagcgggttcaccagttgcctttgctgaaccg
aatatggttttcgcttaa
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