Vibrio navarrensis: IF132_13525
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Entry
IF132_13525 CDS
T07785
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00020
Citrate cycle (TCA cycle)
vnv00270
Cysteine and methionine metabolism
vnv00620
Pyruvate metabolism
vnv00630
Glyoxylate and dicarboxylate metabolism
vnv00680
Methane metabolism
vnv00710
Carbon fixation by Calvin cycle
vnv00720
Other carbon fixation pathways
vnv01100
Metabolic pathways
vnv01110
Biosynthesis of secondary metabolites
vnv01120
Microbial metabolism in diverse environments
vnv01200
Carbon metabolism
Module
vnv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vnv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vnv_M00012
Glyoxylate cycle
vnv_M00168
CAM (Crassulacean acid metabolism), dark
vnv_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IF132_13525 (mdh)
00620 Pyruvate metabolism
IF132_13525 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
IF132_13525 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
IF132_13525 (mdh)
00720 Other carbon fixation pathways
IF132_13525 (mdh)
00680 Methane metabolism
IF132_13525 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
IF132_13525 (mdh)
Enzymes [BR:
vnv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
IF132_13525 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Semialdhyde_dh
DUF5848
Motif
Other DBs
NCBI-ProteinID:
QOD69778
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All DBs
Position
1:complement(1477982..1478914)
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AA seq
310 aa
AA seq
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MKVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAG
EDPTPALEGADVVLISAGVARKPGMDRADLFNVNAGIVKALAERIAVVCPTACVGIITNP
VNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKGKNPNEVRVPVIGGHSGV
TILPLLSQVEGVEFTDEEVAALTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLALVK
ALQGEEVVEYAYVEGNGEHTSFFAQPVKLGKNGVEEILPYGELSAFEQAALDGMLDTLQG
DIQIGVDFVK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagctgttattggtgccgcgggtggcatcggtcaagccctagctcttttactg
aagaaccgcctgccagcgggttcagatttagccctatacgatattgctcctgttactcct
ggtgttgctgcggatctaagccatattccaacgccagtttcgatcaaaggttacgcgggt
gaagatccaactcctgcacttgaaggtgcggatgtggtgctgatctcggctggtgtggca
cgtaaacctggtatggatcgcgccgatctgtttaatgtcaacgctggcatcgtaaaagca
ctggcggaacgtattgcggtcgtttgtccaacggcgtgtgttggtattatcaccaaccca
gtgaacacaaccgtgccaatcgccgctgaagtactcaagaaagctggcgtttatgacaag
cgcaaactgtttggtgtgaccacgctggatgtgattcgttctgaaacttttgtcgctgaa
ctaaaaggcaaaaaccctaatgaagtccgcgttccggttatcggtggtcactcaggcgta
accatcttaccgctactttctcaggtggaaggtgttgaatttaccgatgaagaagttgca
gcgctgacgaaacgtattcaaaacgcaggtactgaagtggttgaagctaaagcgggtggc
ggctcagcgactctctctatggggcaagctgcatgtcgttttggccttgcgttagtgaaa
gcgcttcagggggaggaagtggttgaatacgcatacgtcgaaggcaatggcgagcatacc
agcttcttcgcgcagccagtcaaactgggtaagaacggcgtagaagagatcctaccatat
ggcgaactcagcgcatttgagcaagccgctcttgatggcatgctggatacgctacaaggc
gacatccaaatcggtgttgatttcgttaagtaa
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