Vibrio navarrensis: IF132_17335
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Entry
IF132_17335 CDS
T07785
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00270
Cysteine and methionine metabolism
vnv00450
Selenocompound metabolism
vnv00670
One carbon pool by folate
vnv01100
Metabolic pathways
vnv01110
Biosynthesis of secondary metabolites
vnv01230
Biosynthesis of amino acids
vnv04981
Folate transport and metabolism
Module
vnv_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
IF132_17335 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
IF132_17335 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IF132_17335 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IF132_17335 (metH)
04980 Cobalamin transport and metabolism
IF132_17335 (metH)
Enzymes [BR:
vnv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
IF132_17335 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QOD70425
LinkDB
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Position
1:2286705..2290385
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AA seq
1226 aa
AA seq
DB search
MGSNIREQIEAQLKQRILLIDGGMGTMIQGYKLQEQDYRGERFANWHCDLKGNNDLLVLS
QPQLIKEIHCAYLEAGADILETNTFNATTIAMADYEMESLSEEINFAAAKLAREAADEWT
AKNPQKPRYVAGVLGPTNRTCSISPDVNDPGYRNVTFDALVQAYSESTRALIRGGSDLIL
IETIFDTLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVR
PISFGLNCALGPDELRPYVEELSRISETYVSTHPNAGLPNAFGEYDLSPQEMAVHVKEWA
QSGFINLVGGCCGTTPEHIRHMALAVEGVTPRVLPDIPVACRLSGLEPLTIAKDTLFVNV
GERTNVTGSARFKRLIKEELYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNL
CASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKAKFVEQAKLIRRYGAA
VIVMAFDEVGQADTRERKLEICTNAYRILVDEVGFPPEDVIFDPNIFAIATGIEEHNNYA
VDFINAVADIKRDLPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKNGMDMGIVNA
GQLEIYDNVPEKLREAVEDVVLNRREDGTERLLEIAEAYRENAVGKVEDASALEWRTWPV
AKRLEHALVKGINEFIVEDTEEARLNASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVV
KSARVMKQAVAHLEPFINASKQSGTTNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIID
LGVMVPCEQILKVAKEEQVDIIGLSGLITPSLDEMVHVAKEMERQGFDLPLLIGGATTSK
AHTAVKIEQNYSHPVVYVNNASRAVGVCTSLLSDELRPAFVERLQADYELVRDQHNRKKP
RSKPVTLAEARANKAAIDWQSYTPPAPAKPGVHVFADFDVAVLRQYIDWTPFFMTWSLVG
KYPTIFDHEEVGEEAQRLFKDANDWLDKIEQEGLMKASGMCALFPAASIGDDIEVYSDES
RSQVVKVLHNLRQQTEKPKGANYCLSDYVAPKASGKKDWIGAFAVTGGINERELADEFKA
QGDDYNAIMIQAVADRLAEAFAEYLHERVRKEIWGYAPDENLSNEELIREKYQGIRPAPG
YPACPEHTEKGALWELLNVEQTIGMSLTSSYAMWPGASVSGWYFSHPESRYFAIAQIQQD
QVEDYAQRKGWDLLEAEKWLGPNING
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
gtgggaagtaatattagagagcagattgaagcgcaactaaagcaacgtatcttattgatt
gatggtggtatgggaaccatgatccaaggttacaagttgcaagagcaagactatcgtggt
gagcgtttcgcaaattggcactgtgatctcaaaggcaacaatgacttgctggtgttatcc
cagcctcagttgatcaaagaaattcactgcgcttacttggaagcgggtgccgatattctc
gaaaccaacacttttaacgccaccaccattgccatggcggactacgaaatggaaagctta
agcgaagaaattaacttcgctgcggctaaactggctcgtgaagcggcggacgagtggacc
gctaaaaatccgcaaaaaccacgctatgtggctggggtgctcggtccaaccaaccgtact
tgttctatttctcccgatgtgaacgatccgggctaccgcaatgtcacttttgatgctttg
gtgcaagcgtattcggaatcgactcgagcgctgatccgcggcggatccgatctcattctg
attgaaaccatttttgataccttgaacgcgaaagcgtgcgcgtttgccgtcgattccgtg
ttcgaggaacttggcatcagcttaccggtaatgatctccggtaccattaccgatgcttcc
ggacgcacactctctgggcaaacgaccgaggccttctacaacgcgttgcgccatgtgaga
cctatctcgtttggtttgaactgcgctttgggtccggacgaactgcgtccgtatgttgaa
gagctgtcacgtatctcagaaacgtacgtctctacccacccgaatgcgggtttgccaaac
gcgtttggtgaatacgatctctcgccgcaggagatggcggtgcacgtcaaagagtgggct
caaagcggttttatcaacctcgttggtggctgctgcggtaccacgcccgaacacattcgc
catatggcgctggcggttgaaggggtcacgccgcgtgtcttgccagacattccggtggcg
tgtcgtctctctgggctagagcctctgacgatagcgaaagataccttgtttgttaacgtc
ggtgaacgtaccaacgtaaccggctctgcgcgttttaagcgtttgattaaagaagagctt
tacgatgaagccttggatgtggcccgcgagcaggtagaaaacggcgcgcagattattgac
atcaacatggatgaaggcatgttggatgccgaggcgtgtatggtgcgttttctcaacttg
tgtgcgtccgagccagaaatttccaaagtgccggtgatggtcgattcctcgaagtgggaa
gtgattgaagcgggcctgaaatgcattcaaggcaaaggcatcgtcaactcgatttccctc
aaagagggtaaggccaagtttgttgagcaggccaaactgatccgccgttatggagcggcc
gtgattgtcatggcgtttgacgaggtgggccaagcggacacgcgcgagcgcaaactggag
atctgtaccaacgcttatcgaattctggtcgatgaagtcggctttccaccggaagatgtg
atcttcgacccgaacatttttgccatcgcgactggcattgaagagcacaataactacgcg
gtcgactttattaatgcggtggcggacatcaaacgcgatctgccgcatgcgatgatttca
ggcggggtgtcgaacgtttctttctctttccgcggcaataactatgtgcgcgaagcgatt
catgcagtattcctctaccactgttttaaaaacggtatggacatgggcatcgtcaacgcc
gggcagctcgaaatttacgataacgtgcctgagaaactgcgtgaagcggtcgaagatgta
gtgctgaatcgccgtgaagatggcactgagcgattgttggaaatcgccgaagcgtatcgt
gaaaatgccgtgggcaaagtggaagatgcttcggcattggagtggcgtacttggcctgtg
gctaaacggcttgaacacgcgctggtgaagggcattaatgaatttatcgtcgaagacacc
gaagaggcgaggctgaacgcgtctaagccactggaagtgattgaagggccgttgatggac
ggcatgaacgtggtcggtgatttgtttggggaaggcaagatgttccttcctcaggtggtg
aaatcagcgagggtgatgaagcaggcggtggcccacttagagccgtttattaatgcgtct
aagcagtccggtacaaccaacggtaagattttgctcgccacggtgaaaggcgacgtgcac
gatatcggcaagaacattgttggtgtggttttacaatgtaacaactacgaaatcattgat
ttaggtgtcatggttccgtgtgaacagatcctcaaagtggccaaagaagagcaggtcgac
atcattggtctctcaggtcttatcactccgtctttggatgaaatggtgcatgtggccaaa
gagatggagcgtcagggctttgatttgccactgctgatcggcggtgcgaccacctccaaa
gcgcacaccgcagtcaaaattgagcagaactattctcatcccgtggtgtacgtcaataat
gcttcgcgtgcggttggggtgtgtacttcgctgctgtctgacgaactgcgtccggcgttt
gtcgaacgcttgcaggccgattatgagttggtgcgcgatcagcacaaccggaagaaaccg
agaagtaaaccagtcaccttggcagaagcacgcgccaacaaagcggcgatcgactggcag
agctacacgccgccagcaccggctaagccgggtgtgcatgtgtttgccgattttgatgtg
gcggttttgcgtcagtatatcgactggactccattctttatgacgtggtcgctggtgggc
aaatacccgaccattttcgaccacgaagaggtcggtgaagaggcgcagcgcttgttcaaa
gatgccaatgattggctggataaaattgagcaagaagggttgatgaaagccagtggcatg
tgtgcgctcttcccagccgccagcattggtgacgatattgaggtgtatagcgacgaatcg
cgtagccaagtggtcaaagtgctgcacaatttaagacagcaaaccgagaagccaaaaggc
gccaactactgtttgtcggattacgttgcgccgaaagcctcaggcaaaaaggattggatt
ggtgcgtttgcggtcactggcggcatcaatgagcgtgagctggctgatgagtttaaagcg
cagggcgatgattacaacgcgatcatgattcaggcggtggcggatcgcctggcagaagcc
tttgccgaatatctgcatgagagagtacgtaaagaaatttggggctatgcgccggatgaa
aacttatccaatgaagaactgatccgcgagaaataccaaggtattcgtcctgcacccggt
tatccagcgtgtccggagcacacggaaaaaggcgcattatgggaactgctcaatgtcgag
caaactataggcatgtcactgaccagcagttatgcaatgtggccgggggcatccgtgtcg
ggctggtatttctctcatccagaatcgcgctactttgcgatcgcacagatccagcaagat
caggtagaagactacgcgcagcgcaaaggctgggatctacttgaagcggaaaaatggctg
gggccgaatatcaacggttaa
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