Vogesella sp. XCS3: LCH97_05940
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Entry
LCH97_05940 CDS
T07617
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCH97_05940 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vox03400
]
LCH97_05940 (nth)
Enzymes [BR:
vox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LCH97_05940 (nth)
DNA repair and recombination proteins [BR:
vox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCH97_05940 (nth)
Prokaryotic type
LCH97_05940 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UDM18209
LinkDB
All DBs
Position
1262648..1263280
Genome browser
AA seq
210 aa
AA seq
DB search
MNKTIRQQIFARLQAHNPHPTTELEYATPFQLLIAVLLSAQATDVGVNKATRVLFQVAPT
PDKMYSLGVAGLEEYIKTIGLYRTKAKNTIETCRILLQQHGGEVPENREALEALPGVGRK
TANVVLNTAFGHPTIAVDTHIFRVSNRTRLAPGKDVREVEDKLLRFVPTEYKQDAHHWLI
LHGRYVCKARKPDCERCVIADLCEYPAKPL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccatacgccagcaaatctttgcccgcctgcaagcccacaacccgcacccc
accactgagctggaatacgccacgccgttccagctactgatcgccgtgttgctgtcggcg
caagctaccgacgtgggcgtgaacaaagccacacgcgtattgttccaggtagcgcccacg
ccggacaagatgtactcgctgggcgtggccggactggaggagtacatcaagaccatcggc
ctgtaccgcaccaaggccaaaaacactatcgaaacctgccgcatcctgctgcaacagcac
ggcggcgaggtgccggaaaaccgcgaagcactggaggccctgccaggggttggccgcaaa
accgccaatgtggtgttgaatacggcctttggccaccccaccattgcggtagacacgcat
atcttccgcgtcagtaaccgcacccggctggcgcccggcaaagacgtgcgcgaagtagaa
gacaaactgttacgttttgtgcccaccgaatacaaacaggacgcgcatcattggcttatc
ctgcacggacgctacgtttgcaaagccagaaagcccgactgcgaacgctgcgtcattgca
gacctctgcgaatatccggcaaaaccgctatga
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