Vogesella sp. XCS3: LCH97_08410
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Entry
LCH97_08410 CDS
T07617
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
vox
Vogesella sp. XCS3
Pathway
vox00020
Citrate cycle (TCA cycle)
vox00785
Lipoic acid metabolism
vox01100
Metabolic pathways
vox01110
Biosynthesis of secondary metabolites
vox01120
Microbial metabolism in diverse environments
vox01200
Carbon metabolism
vox01210
2-Oxocarboxylic acid metabolism
Module
vox_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vox_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LCH97_08410
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LCH97_08410
Enzymes [BR:
vox01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LCH97_08410
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
OxoGdeHyase_C
E1_dh
2-oxogl_dehyd_N
SHOCT-like_DUF2089-C
Cdh1_DBD_1
SAM_BAF
Motif
Other DBs
NCBI-ProteinID:
UDM18661
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All DBs
Position
complement(1767376..1770204)
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AA seq
942 aa
AA seq
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MMQSMYSHSHLFGGNAPFIEELYEQYLADPNVVPAEWRDYFDKLAMAPGAAERDVAHQPI
QESFIQLAKKPLAGQRSSDVANWESMQKQVGVLKLISAWRVLGSRQANLDPLKRMDQATM
RELDPAQHGLSDADMAVQFNVGSLVAPQKLPLSDILARLKQTYGGNVGVEYMHITTSEEK
HWVQKRFEGDLSTPRYNAEKKQRILKQITAAETLERYLHTRYVGQKRFSLEGGESAIAAL
DHLIQNGSAYGVEELIIGMAHRGRLNVLVNTLGKLPRDLFAEFEGKAAQELASGDVKYHM
GFSSDIPTANGPMHVSLAFNPSHLEIVNPVVEGSVRARQERRNDVEGKSVVPLLIHGDSA
FAGLGVNQGTFNLSQTRGYRTGGTIHLVINNQVGFTTSDTRDMRSTLYCTDVAKMIEAPI
FHVNGDDPEAVCYVMQAALEYRMQFKKDVVIDLVCYRKLGHNEGDDPFLTQPMMYKRIAK
HAGVRAMYAQRLVAEGVLKAEAADDLIRAYRDALDKGEHVEQTVLSNYRREHALDWSQYQ
GTHWAHPTDTSLQQADVQRLAEKFTHVPADFKPHPTVKRVIEARQAMARGEQPLDWGMAE
TLAYASLVTNGYAVRISGEDSGRGTFSHRHSVLHDQNREKWDQGTYIPLANMSENQADFR
VIDSILNEEAVLAYEYGYACSAPDQLVIWEAQFGDFANGAQVAIDQFISSGETKWGRLCG
LTTILPHGYDGQGPEHSSARLERWLQLCAEHNMQIVMPSEAAQMFHMLRRQVLRPYRKPL
VIFLSKRLLRYKDSMSPIETITQGSFRPVIGDASIQDPKKVKRVLLCAGQVYYDLVNGRK
ERGMEEDVAIIRIEQLYPFPTELLQAELAQFSHVKELLWVQEEPRNQGAWYQIRHRLEGL
LQAKQTLDFAGRPSSASPAVGYMSKHVAQLKSFVEEAFSLNK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatccatgtacagtcattcccacctgtttggtggaaatgcaccgttcatcgag
gaactgtacgaacagtatctcgctgatccgaacgtggttccggcggaatggcgggattac
ttcgataagctggcaatggcaccgggtgcggcagagcgcgacgtagcgcatcagcctatc
caggagtcgttcatccagctggccaagaagccgctggctggccagcgcagcagcgatgtg
gccaactgggagtccatgcaaaagcaggtaggcgtactgaagctgatttcggcttggcgc
gtactgggttcccgccaggctaacctggacccgctcaagcgtatggaccaggcgaccatg
cgtgagctggacccggctcaacatggcctgtccgacgccgatatggctgtgcagttcaat
gtaggttcgctggttgccccgcaaaagctgccactgtccgacattctcgcccgtctgaaa
cagacctacggcggcaatgtgggcgtggaatacatgcacatcaccacctctgaagaaaaa
cactgggtacagaagcgctttgaaggcgacctgtccaccccgcgttacaacgcagagaaa
aaacaacgcattctgaagcagatcactgcagcagaaacgctggaacgctacctgcatacc
cgctatgtaggccagaagcgcttctcgctggaaggtggcgaatccgccatcgccgcgctg
gaccacctgatccagaacggtagtgcctacggcgtagaagagctgattatcggcatggcc
caccgtggccgcctgaacgtgctggtaaacaccctgggcaagctgccgcgtgacctgttt
gccgagttcgaaggcaaggccgcacaagagctggcctcgggcgacgtgaagtaccacatg
ggcttctcgtccgacatccctaccgccaacggcccgatgcacgtatcgctggcgtttaac
ccgtcccacctcgagatcgtgaacccggtagtagaaggttccgtgcgcgcccgccaggag
cgccgcaacgacgtggaaggcaaatcggtcgtgccgctgctgattcacggtgactccgcc
tttgccggcctgggcgtgaaccagggcaccttcaacctgtcgcaaacccgtggctatcgt
accggcggtaccatccacctggtgatcaacaaccaggtaggctttaccacctccgatacc
cgcgacatgcgttccaccctgtactgtaccgacgtggccaagatgatcgaggcaccgatc
ttccacgtgaacggtgacgatccggaagccgtctgctacgtgatgcaggctgcgctggaa
taccgcatgcagttcaagaaggacgtggttatcgacctggtgtgctaccgcaagctgggc
cacaacgaaggcgacgatccgttcctgacccagccgatgatgtacaagcgcatcgccaag
cacgccggtgtgcgcgccatgtacgcacagcgcctggtagccgaaggtgtactgaaggcc
gaagccgccgacgacctgatccgcgcttaccgtgacgcgctggacaagggcgaacacgtc
gagcagaccgtactgtccaactaccgccgcgaacacgcgctggactggagccagtatcag
ggcacccactgggctcaccctaccgataccagcctgcagcaagccgacgtacagcgtctg
gccgaaaaattcacccacgtaccggccgacttcaagccgcaccctaccgtgaagcgcgtt
atcgaagcccgccaagccatggcgcgtggcgagcagccgctggactggggtatggcagag
accctggcctacgccagcctggtaaccaacggctacgccgtacgcatctcgggtgaagac
tcgggccgcggtaccttctcgcaccgccactcggtactgcacgaccagaaccgtgaaaag
tgggaccaaggcacctacatcccgctggccaatatgagcgaaaaccaggccgacttccgt
gtgatcgactcgatcctgaacgaagaagcggtactggcctacgagtacggctatgcctgc
tccgccccggaccagctggtgatctgggaagcccagttcggcgacttcgccaacggcgcc
caggtagccattgaccagttcatctcctctggcgaaaccaaatggggccgtctgtgcggc
ctgaccaccatcctgccgcacggctacgatggccaaggcccggagcactcctccgcccgt
ctggaacgctggctgcagctgtgcgccgagcacaatatgcagatcgtgatgccgtccgaa
gctgcgcagatgttccacatgctgcgtcgccaggtactgcgcccgtatcgcaagccgctg
gtgatcttcctgtccaagcgcctgctgcgctacaaagactcgatgagcccgatcgaaacc
atcacccagggctctttccgcccggtgatcggcgacgccagcatccaggacccgaaaaag
gtgaaacgcgtactgctgtgcgctggccaggtgtactacgacctggtcaacggccgcaaa
gagcgtggcatggaagaagacgtggccatcatccgtatcgaacagctgtatccgttcccg
accgagctgctgcaagccgagctggcccagttctcgcacgtgaaagagctgctgtgggta
caggaagagccgcgtaaccagggtgcctggtaccagatccgccaccgcctggaaggcctg
ctgcaagccaagcagacgctggactttgccggtcgcccatcgtcggcatccccagccgta
ggctatatgagcaagcacgttgcccagctcaagtccttcgtcgaagaagcgttttcgctg
aacaaataa
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