Vogesella sp. XCS3: LCH97_09390
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Entry
LCH97_09390 CDS
T07617
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vox
Vogesella sp. XCS3
Pathway
vox01501
beta-Lactam resistance
vox01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vox00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LCH97_09390
01503 Cationic antimicrobial peptide (CAMP) resistance
LCH97_09390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vox03036
]
LCH97_09390
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vox02000
]
LCH97_09390
01504 Antimicrobial resistance genes [BR:
vox01504
]
LCH97_09390
Chromosome and associated proteins [BR:
vox03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LCH97_09390
Transporters [BR:
vox02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LCH97_09390
Antimicrobial resistance genes [BR:
vox01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LCH97_09390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
BSH_RND
Beta-barrel_RND_2
BSH_CusB
Biotin_lipoyl
HH_AprE
BSH_YhbJ
BSH_YknX
HH_MFP_RND
PTS_EIIA_1
CzcB_C
Beta-barrel_ALG44
Motif
Other DBs
NCBI-ProteinID:
UDM15541
LinkDB
All DBs
Position
complement(1982580..1983701)
Genome browser
AA seq
373 aa
AA seq
DB search
MHSYRLRPLAAMLLLGLAVMGTACNKSDTDAAKAASAAAASTPARALSPADLLVTAVAPV
AEQLPFTATLNPLNSAEVAAQSEGTVLAVLVREGEAVQKGQLLARIDAEALRQNVLEMQA
QLANDEARLKLARLKRDKQRELYQQGFISKLAFDEIDNDYQIRVGELAARRSQLARAKTS
LGETEVRAPMAGTVYARRTQPGEQASKNQKLFAIADLSVLEAAANMPAREIGKLKPGQAA
RFTVEGLAGEFRGELVRINPVAATATRTFSVYVRVANQDGRLKAGQFAKGGIVQREVLDA
VRLPQAAVQQADSASPWVMLVQGGRLVKQPVRVVLRSDSERVLAVQGVAAGQTILAAALL
GVKPGDAVTLPKP
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcatagctacagactacgccccctggccgccatgctgctgcttggcctggcggtgatg
ggcaccgcctgcaataaaagcgataccgatgcagccaaggctgccagcgcggcggcagcc
agtacgccagcccgcgcgctatcgccggccgacttgctggtgacggcggtagcaccggta
gccgagcagctaccctttaccgccacgctgaacccgctaaacagcgccgaggtcgccgcg
cagagcgaaggcaccgtgctggccgtgctggtacgcgagggcgaagcggtacagaaaggc
cagttgctggcgcgcatcgacgccgaagcgctgcgccagaacgtgctggaaatgcaggcc
cagttggccaacgacgaagcgcggctgaagctggcccgcctcaagcgcgacaagcagcgc
gagctataccagcaagggtttatctccaagctggcattcgatgaaatcgacaacgattac
caaatccgcgtgggcgagttggccgcacgccgcagccagctggcgcgtgccaaaaccagc
ctgggtgaaaccgaggtgcgcgcgccgatggccggtaccgtgtacgcacggcgcacccag
ccgggcgagcaggccagcaagaaccagaaactgtttgccattgccgacctgtcggtgctg
gaggctgcggccaacatgccagcgcgggaaatcggcaagctcaagcctggccaggctgcc
cgctttacggtggaagggctggccggcgaattccgtggcgagctggtgcgtatcaacccg
gtagcagccaccgccacgcggacgtttagcgtctatgtgcgtgtggccaaccaggatggc
cgcctgaaagccggccagtttgccaaaggcggcatcgtgcagcgcgaggtgctggacgcc
gtgcgcctgccgcaagcggcggtacagcaggccgacagcgccagcccgtgggtgatgctg
gtacaaggcgggcggctggtcaaacagccggtgcgtgtcgtgctgcgctcggatagcgag
cgcgtgctggcggtgcaaggcgtggctgccgggcagaccatcctggcggcggcgctactg
ggcgtgaagcccggtgacgccgtgaccctgcccaaaccttaa
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