Vibrio parahaemolyticus RIMD 2210633: VP0325
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Entry
VP0325 CDS
T00120
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00020
Citrate cycle (TCA cycle)
vpa00270
Cysteine and methionine metabolism
vpa00620
Pyruvate metabolism
vpa00630
Glyoxylate and dicarboxylate metabolism
vpa00680
Methane metabolism
vpa00710
Carbon fixation by Calvin cycle
vpa00720
Other carbon fixation pathways
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01120
Microbial metabolism in diverse environments
vpa01200
Carbon metabolism
Module
vpa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vpa_M00012
Glyoxylate cycle
vpa_M00168
CAM (Crassulacean acid metabolism), dark
vpa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VP0325
00620 Pyruvate metabolism
VP0325
00630 Glyoxylate and dicarboxylate metabolism
VP0325
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
VP0325
00720 Other carbon fixation pathways
VP0325
00680 Methane metabolism
VP0325
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VP0325
Enzymes [BR:
vpa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
VP0325
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Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
DUF5848
Motif
Other DBs
NCBI-ProteinID:
BAC58588
UniProt:
Q87SU7
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All DBs
Position
1:320744..321679
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AA seq
311 aa
AA seq
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MKVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAG
EDPTPALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVVCPKACVGIITNP
VNTTVPIAAEVLKKAGVYDKRRLFGITTLDVIRSETFVAELKGKDPSDIRVPVIGGHSGV
TILPLLSQVEGVEFTAEEVEALTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLALVR
ALQGEEGVVECAYVEGDSEHAPYFAQPVKLGKEGVEEVLSYGELSDFEKAALDGMLETLN
GDINIGVEFAK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagccgttattggtgccgctggtggcatcggtcaagcccttgcccttctgctt
aagaaccgtcttcctgctggttctgatttagccctatacgatattgctccagttacgcct
ggcgtagcagcagatcttagccacatcccaacaccagtatcgatcaaaggttacgctggt
gaagatccaactcctgcgctagaaggtgcagatgtagttcttatctctgcgggtgttgct
cgtaagccgggcatggatcgtgcggatctgttcaatgtaaacgctggtattgtgaaatca
ctcgctgaaaagattgcggttgtttgtcctaaagcatgtgtaggtatcatcactaaccca
gtgaacacaacagtgccaatcgctgctgaagttctgaagaaagcgggcgtttacgacaag
cgtcgcctattcggtattaccacactagacgtgatccgttcagaaacgtttgttgctgag
ctaaaaggcaaagatcctagcgatatccgtgtaccagttatcggtggtcactctggcgtg
acaattcttcctcttctttctcaagtagaaggtgtggagtttacagctgaagaagtagaa
gctctgactaagcgtattcaaaacgcaggcacagaagttgttgaagcaaaagcgggtggc
ggtagtgcgacactttctatgggccaagcggcttgtcgtttcggtctagcacttgtacga
gctcttcaaggtgaagaaggcgttgttgagtgtgcttacgttgaaggtgacagcgagcac
gcaccttactttgcacaacctgtgaagctgggcaaagaaggcgtagaagaagtactaagc
tacggcgaattgagcgacttcgaaaaagcggcactagatggaatgctagaaacgctaaat
ggcgacatcaacattggtgttgaattcgctaaataa
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