Vibrio parahaemolyticus RIMD 2210633: VP0465
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Entry
VP0465 CDS
T00120
Name
(GenBank) UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00540
Lipopolysaccharide biosynthesis
vpa01100
Metabolic pathways
Module
vpa_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VP0465
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpa01005
]
VP0465
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
VP0465
Lipopolysaccharide biosynthesis proteins [BR:
vpa01005
]
Lipid A
VP0465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BAC58728
UniProt:
Q87SF9
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All DBs
Position
1:468342..469259
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AA seq
305 aa
AA seq
DB search
MIRQRTLKEIVKTTGVGLHSGRKVTLTLRPAAANTGIIYRRTDVNPPVDFPADPASVRDT
MLCTALVNDEGVRISTVEHLNAALAGMGIDNIIVEVDAPEIPIMDGSASPFVYLLQQAGI
EMQNVPKRFIRIKKPVRFEDGDKWAEFVPFNGFRMDFEIDFNHPAIESDEQRLLFDFSSQ
GFVREISRARTFGFMRDIEYLQSQNLVLGGSFDNAIVLDDYRILNEEGLRFENEFVTHKV
LDAIGDLYMCGHPIIGEFRAYKSGHGLNNQLLRAVLADQEAWEWTTFEEEVGSPVAFAEP
NMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacaacgtactctgaaagaaatagtgaaaactactggtgtgggtctccactct
ggtcgtaaagtcacgcttactctgcgcccggctgctgcaaacacaggtattatttaccgt
cgtacagatgtaaatccacctgtagattttccagctgatccagcttctgttcgtgacact
atgctttgtactgcattagtgaacgacgaaggtgtgcgtatttcaacggttgaacacttg
aacgctgcacttgcaggtatgggcatcgacaacattattgttgaagttgacgcacctgaa
atcccaattatggatggtagcgcaagcccgttcgtttacctgcttcagcaagctggtatc
gaaatgcaaaacgttcctaagcgttttatccgcattaaaaagccagttcgttttgaagat
ggcgataagtgggcagaatttgtcccatttaacggcttccgtatggacttcgaaattgac
tttaaccaccctgcgattgaatcagacgagcagcgcctactgtttgatttctcatctcaa
ggtttcgttcgcgaaatttctcgtgcacgtacgtttggctttatgcgtgatatcgagtac
ctacaatctcaaaacctagttttgggtggtagtttcgataatgctatcgtattggacgat
taccgaattctgaacgaagaaggtctgcgctttgagaacgagtttgttactcacaaggtg
ttagatgcaattggcgacctttacatgtgtggtcatccaattattggtgaattccgtgct
tataaatcaggtcacggtttaaacaaccaacttctacgcgcagttttggcggatcaagaa
gcatgggaatggacaactttcgaagaagaagtcggttctccagtcgcttttgcagagcca
aacatggtgctagcataa
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