Vibrio parahaemolyticus RIMD 2210633: VP1248
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Entry
VP1248 CDS
T00120
Name
(GenBank) D-serine dehydratase
KO
K01753
D-serine dehydratase [EC:
4.3.1.18
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00260
Glycine, serine and threonine metabolism
vpa00470
D-Amino acid metabolism
vpa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VP1248
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VP1248
Enzymes [BR:
vpa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.18 D-serine ammonia-lyase
VP1248
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Gene cluster
GFIT
Motif
Pfam:
PALP
NmrA
Motif
Other DBs
NCBI-ProteinID:
BAC59511
UniProt:
Q87QA2
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All DBs
Position
1:1315952..1317283
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AA seq
443 aa
AA seq
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MNKLNVEVLKKQFPLVEQLINLDEVCWFNPNVTSLEEGLPHVGLNAEDIHVASARLKRFA
PYLMKAFPETKAASGLIESPVVDIPKMKAALETQYNVPIFGRLMLKLDSHLPISGSIKAR
GGIYEVLVHAEKLAIATGLLSESDDYSKLLSGEFRQFFQQYSIAVGSTGNLGMSIGMMSA
KLGFSVSVHMSADAREWKKNKLRSHGVNVVEYEQDYGVAVEQGRKQAESDPNCFFIDDEN
SQTLFLGYSVAGERLKQQFDDLGIVVDERHPLFVYLPCGVGGGPGGVAFGLKVAFGDHVH
CIFAEPTHSPCMLLGVHTGLHDEIAVQDIGIDNLTAADGLAVGRPSGFVGRAMERLIDGY
YTVTDERMYQLLGELSEREGINLEPSALAGMMGAVHVSGSLHYQTRLQLTDERLKNATHL
VWATGGGMVPEAEMSADLAKSGR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctgaatgtggaagtgcttaaaaaacaattcccacttgtagagcaactgatc
aacctagatgaagtttgctggtttaatcccaacgtgacctcgcttgaagaaggtttgcca
cacgtcggattgaacgcagaagatattcatgtcgcgagcgcaaggctcaagcgctttgct
ccttatcttatgaaagcttttcctgaaaccaaagccgcttctggtctcattgagtcgcct
gtagtggacattccaaagatgaaagcggctttggaaactcagtacaacgtcccaatattc
ggccgccttatgctcaagcttgatagtcacctaccaatatccggctcgataaaagcccgt
ggtggcatttatgaagtgttagttcatgcagaaaaactggcgattgccacagggttgtta
agtgagagtgatgattacagcaagctgctgagtggtgagttccgacaatttttccaacaa
tacagcatcgcggttggttcaacgggaaatctaggcatgtcgataggcatgatgagtgcc
aagcttggtttttcagtatcggttcatatgtctgccgatgcgagagagtggaagaaaaac
aaacttcgatcgcacggtgtcaacgtggttgagtacgagcaagattatggtgttgcggtt
gagcaaggtcgaaaacaggcagagagcgatcccaactgcttttttatcgatgatgaaaac
tcacaaaccttgttcctaggttactcggttgcaggtgaacgcttaaaacaacaatttgat
gatttaggtattgtggttgatgaacgtcatccactgtttgtgtatttaccatgcggtgtt
ggtggtgggccaggtggtgttgcttttgggctaaaggtggcctttggtgaccacgtgcat
tgcatcttcgctgagccaacacattctccttgcatgttgttgggagtacatacgggtttg
catgatgagatagcggtgcaagatatcggtatagataatctcaccgcagcagatggcttg
gccgttggtcgtccttctggttttgttgggcgagctatggagcggttaattgatggttac
tacaccgtgacggatgaacgtatgtatcagcttttaggagagttgagcgaacgagaaggc
atcaatttggagccctctgcattagccggaatgatgggcgcggtgcatgtatcgggttct
ctacactaccagactcgtttacagcttacggatgaacgtttgaaaaatgccacacactta
gtttgggcgaccgggggagggatggtgccagaagccgaaatgtcagctgacttggcgaag
tctggtcgttag
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