KEGG   Vibrio parahaemolyticus RIMD 2210633: VP2717
Entry
VP2717            CDS       T00120                                 
Name
(GenBank) cobalamin-dependent methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00270  Cysteine and methionine metabolism
vpa00450  Selenocompound metabolism
vpa00670  One carbon pool by folate
vpa01100  Metabolic pathways
vpa01110  Biosynthesis of secondary metabolites
vpa01230  Biosynthesis of amino acids
vpa04981  Folate transport and metabolism
Module
vpa_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    VP2717
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    VP2717
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    VP2717
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    VP2717
   04980 Cobalamin transport and metabolism
    VP2717
Enzymes [BR:vpa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     VP2717
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: BAC60980
UniProt: Q87L95
LinkDB
Position
1:complement(2875541..2879221)
AA seq 1226 aa
MGSKVRQQIEAQLKQRILLIDGGMGTMIQGYKLEEQDYRGERFANWHCDLKGNNDLLVLS
QPQLIKEIHSAYLEAGADILETNTFNATTIAMADYEMESLSEEINFAAAKLAREVADEWT
AKTPDKPRYVAGVLGPTNRTCSISPDVNDPGYRNVSFDELVEAYSESTRALIRGGADLIL
IETIFDTLNAKACAFAVDSVFEELGVALPVMISGTITDASGRTLSGQTTEAFYNSLRHVR
PLSFGLNCALGPDELRPYVEELSRISESFVSAHPNAGLPNAFGEYDLSPEDMAEHVKEWA
SSGFLNLIGGCCGTTPEHIRQMAQAVEGVTPRALPDLPVACRLSGLEPLTIEKETLFINV
GERTNVTGSARFKRLIKEEQYDEALEVARQQVENGAQIIDINMDEGMLDAQACMVRFLNL
CASEPEISKVPIMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFVEQAKLIRRYGAA
VIVMAFDEVGQAETRTRKLEICTNAYRILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYA
VDFIEAVADIKRDLPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKNGMDMGIVNA
GQLEIYDNVPEKLREAVEDVVLNRRDDATERLLDIAAEYADKGVGKEEDASALEWRTWPV
AKRLEHALVKGITEFIVADTEEARVNAVKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVV
KSARVMKQAVAHLEPFINAEKQSGSSNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIID
LGVMVPCEKILKVAIEENVDIIGLSGLITPSLDEMVHVAKEMERLNFDLPLLIGGATTSK
AHTAVKIEQNYKNPVVYVNNASRAVGVCSSLLSDERRPAFIEKLDADYERVRDQHNRKKP
RTKPVTLEQARANKVAIDWDAYTPPVPAKPGLHIFDDFDVATLRKYIDWTPFFMTWSLVG
KYPTIFKHEEVGEEAQRLFHDANELLDRVEREGLLKARGICGLFPAASVGDDIEVYTDES
RTEVAKVLRNLRQQTEKPKGFNYCLSDYIAPKESGKQDWVGAFAVTGGIGERELADEYKA
QGDDYNAIMIQAVADRLAEAFAEYLHERVRKEIWGYAADENLSNDELIREKYQGIRPAPG
YPACPEHTEKGPLWELLNVEENIGMSLTTSYAMYPGASVSGWYFSHPDSRYFAIAQIQDD
QLESYADRKGWDRIEAEKWLGPNING
NT seq 3681 nt   +upstreamnt  +downstreamnt
gtgggaagcaaagtaagacaacagattgaagctcaattgaagcaacgtatcttattgatt
gatggtggtatgggcaccatgatccaagggtacaaacttgaagagcaagattaccgagga
gagcgctttgccaattggcactgtgatctaaaaggcaacaacgacttgttggtgctaagc
cagcctcaactaattaaggaaatccatagcgcttaccttgaagccggcgctgatattcta
gaaaccaatacctttaacgcgaccaccattgcgatggctgactatgagatggaaagcctg
agtgaagagattaacttcgccgcggcaaaactggctcgtgaagttgccgatgagtggacg
gcgaaaacgcctgacaaacctcgttacgttgcaggtgtacttggtccaaccaaccgaacg
tgctctatctcccctgatgtgaatgatcccggctaccgcaatgtttctttcgatgagctg
gttgaagcgtattccgagtcaactcgagcgttaatcagaggtggcgctgatcttattttg
atcgaaactattttcgatacattaaatgctaaggcatgtgcctttgctgtcgattctgta
tttgaagagcttggtgttgcactgcctgtcatgatttccggtacgattaccgacgcttcg
gggcgcacgttatcagggcaaaccacggaagcattttacaactctctacgtcatgtaagg
ccgttatctttcggtcttaactgtgcattggggccagatgaactgcgcccatacgtggaa
gagctttctcgtatttctgaatcatttgtttccgcacaccctaacgcaggtttgccgaat
gcttttggagaatatgacctttctccagaagatatggcagagcatgtaaaagagtgggct
agcagcggctttttaaatctgattggtggctgttgtggtacaacgccggagcatattcgc
caaatggcgcaggccgttgaaggtgttacacctcgcgctttgccagatttgcctgtggct
tgtcgtctctccggattagagccattaacgattgagaaagagactttgttcatcaatgtc
ggtgagcgaactaacgtcacaggttccgctcgcttcaaacgtttgatcaaagaggaacag
tatgatgaagcattagaagtcgcgcgtcagcaagttgaaaatggtgcccaaatcatcgac
atcaacatggatgaggggatgttagatgcacaggcttgtatggtgcgttttctaaaccta
tgtgcctcagaaccagaaatctccaaagtgccaatcatggtcgactcttccaaatgggaa
gtgatcgaagcgggtctgaaatgcattcaaggtaaaggcattgtgaactctatctctttg
aaggaaggcaaagagaaatttgttgagcaagctaaactgatccgtcgttatggtgcagct
gtgatcgtcatggcattcgatgaggttggtcaggcagaaacgcgcacgcgcaagctagaa
atttgtacaaatgcttatcgtattttggtagacgaagttggctttccgccagaagacatt
atttttgacccgaacatttttgccgtcgcaacggggatcgatgagcacaacaactatgct
gttgattttattgaagctgtagcggacatcaagcgcgatttgccacacgcgatgatttcc
ggtggcgtgtcgaatgtgtctttctctttccgcggtaataactacgttcgtgaagcaatc
catgccgtattcctttatcactgttttaaaaacggtatggacatgggcattgtgaacgcg
gggcagctcgaaatttatgacaacgtaccagaaaaattacgagaagcagtagaagacgtt
gtgcttaaccgtcgagatgacgctacagaaagattgttggatatcgcggctgagtacgca
gataaaggcgttggcaaagaagaagatgcctctgcgcttgagtggcgaacttggcctgtc
gcaaaacgtttagagcatgcgttagttaaagggatcacagagttcattgtcgcagacact
gaagaagcacgtgtgaatgcggtaaaaccacttgaagtgattgaaggccctttgatggat
ggcatgaacgtggtgggtgacctatttggtgagggtaagatgttcttacctcaagtagtg
aaatctgcacgtgtaatgaagcaagccgtcgcacatttagagccttttattaacgccgaa
aaacaatccggtagcagtaacggaaaaattttgttggcgacggtgaagggtgacgtgcac
gacatcggcaaaaacattgtgggcgttgtactgcagtgtaataactacgagatcatcgat
cttggcgtgatggtaccgtgtgaaaagatcttgaaagtcgcgatagaagagaacgttgat
attatcggtttgtcagggttgattaccccatctctggatgaaatggttcatgttgctaaa
gagatggaacgtctcaattttgatcttccgcttctgattggcggagctaccacatccaaa
gctcacactgccgtgaagattgagcagaactacaaaaatccggtggtttacgtaaacaat
gcgtcgcgcgcagtaggggtttgttcgtcattactctccgatgaacgtcgacctgccttt
atagaaaaactggatgcggattatgagcgtgttcgtgaccaacacaatcgtaagaagccg
cgtactaagcctgtcacgttagaacaagcgcgtgcaaacaaagtcgcgatagattgggat
gcatacacgccaccagttcctgcaaaaccaggcctccatattttcgatgattttgatgtc
gcaaccttacgcaagtatatcgactggacgccgtttttcatgacgtggtcgctggtagga
aaatacccgacaatcttcaaacatgaagaagtgggtgaggaggctcagcgtctgttccat
gatgccaatgagttgcttgatcgagttgagcgtgaaggattgcttaaggctcgcgggata
tgtggcctattcccagcggcaagtgtgggtgatgatattgaagtgtacaccgatgagtcg
cgtactgaggttgctaaagtattgcgcaatcttcgtcagcaaacagaaaagcctaaaggc
tttaactactgcttgtcggattacatcgcgccaaaagaatctggcaaacaggattgggtt
ggagcgtttgcagtaactggcggtatcggtgagcgtgagttggccgatgagtacaaagcg
caaggcgatgactacaacgcaatcatgattcaagcggtggcggatcgtttagccgaagct
tttgctgaatacttgcatgagcgtgtcaggaaagaaatttggggctatgcagcagatgaa
aatctatcgaatgatgagctcatccgtgaaaagtaccaagggatccgtcctgcaccgggt
tacccagcttgtcctgagcatacagagaaaggcccgctttgggagttactgaatgttgaa
gagaacatcggtatgtcacttacaacgagctatgcaatgtatccgggggcatcagtgtcc
ggttggtacttctcacatccagactctcgctattttgcgatcgctcagatccaagatgat
cagctagagagttatgctgatcgtaaaggttgggataggatcgaagctgaaaaatggttg
gggccaaacattaacggctaa

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