Vibrio parahaemolyticus RIMD 2210633: VPA0470
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Entry
VPA0470 CDS
T00120
Name
(GenBank) putative multidrug efflux system transmembrane protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa01501
beta-Lactam resistance
vpa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VPA0470
01503 Cationic antimicrobial peptide (CAMP) resistance
VPA0470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpa03036
]
VPA0470
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VPA0470
01504 Antimicrobial resistance genes [BR:
vpa01504
]
VPA0470
Chromosome and associated proteins [BR:
vpa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VPA0470
Transporters [BR:
vpa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VPA0470
Antimicrobial resistance genes [BR:
vpa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VPA0470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_3
HlyD_D23
Biotin_lipoyl
DUF6571
Phage_GPL
Motif
Other DBs
NCBI-ProteinID:
BAC61813
UniProt:
Q87IY6
LinkDB
All DBs
Position
2:467580..468722
Genome browser
AA seq
380 aa
AA seq
DB search
MKAKYKFALVSIAISSALLSGCKTGDIATKTAQAPSVETVTLTETKITPYHTFIGRTEAV
NDVDIMPRVGGELTAIHFKDGDMVEKGQLLFEIDDRPYKAALAYAKASLQKAKAQLVQTT
RDAERVKKLIKDKSISEQQYDDAIAAHAAAIASVEEAKATLVSARLDLEFSSVRAPFSGR
VGFSNFRVGDRISKIQLVPLVSITQIDPIRFGFDVDEKLYRRVRSAIDVAHRNDDKLDVD
LTLTLSDGSLYPLDGKIYAVGNKIDLETGSIRAEAQFDNPTYALMPGEYGNLTIKLRNKT
IDGLLIPSAAVQQDQAGDYVMVVGDDHVVSRRNVELGQTYGVKRAVLTGLAANEKVIVNG
LQKVRPGATVKDVELQSEQG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaaatataaatttgcgttggtatctattgctatatcttctgcattactatca
ggatgcaaaactggcgatatcgcaacgaaaactgcccaagcaccctctgttgaaaccgtt
accctaaccgaaacaaaaatcactccttatcatacttttatcggtcgaactgaagcggta
aatgacgttgatattatgcctcgagtcggtggcgaattaaccgcgattcattttaaagat
ggcgatatggtcgaaaaaggccaattgctgtttgaaatcgacgaccgtccttacaaagcg
gcactggcgtatgcaaaagcgtcgttgcaaaaagcaaaagcacaactcgttcaaactacg
cgtgatgcagaacgtgtgaagaaactcatcaaagataaaagcatcagtgagcagcaatac
gatgacgccattgctgcgcacgccgcagcgattgcttcggtagaagaggcgaaagcgacg
ctggtttcagcaaggctcgatcttgaatttagctctgtgcgtgctcctttctctggccgc
gtgggtttcagcaacttccgagtgggtgaccgtatttcgaaaattcaactcgttcctctt
gtttcgatcactcaaattgacccaattcgctttggctttgatgtggatgagaagctctac
cgccgcgtaagaagcgcgattgatgtggctcatcgtaacgatgacaaactggatgttgat
ttaacactgacgctttcagatggttcattgtatccgcttgatggcaagatctacgccgtt
ggcaacaagatcgatttagaaacaggctcaattcgagcagaagcacaatttgataaccca
acttacgcgcttatgccgggtgaatatggcaacttgaccatcaagctgcgcaacaaaacc
attgatggtttgcttatcccatcggcggctgttcagcaagatcaagcgggtgactacgtc
atggtggttggtgatgatcacgtggtgtcacgtcgtaacgttgaactcggtcagacctac
ggtgtgaaacgtgctgtgctgactggcttggcggctaacgaaaaagtcatcgtcaatggt
ctacaaaaagtgcgtccgggtgcaacggtgaaagacgttgaactacagagtgaacaaggc
tga
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