KEGG   Vibrio parahaemolyticus BB22OP: VPBB_1945
Entry
VPBB_1945         CDS       T02409                                 
Name
(GenBank) Endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VPBB_1945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpb03400]
    VPBB_1945
Enzymes [BR:vpb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VPBB_1945
DNA repair and recombination proteins [BR:vpb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VPBB_1945
 Prokaryotic type
     VPBB_1945
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 HHH_8
Other DBs
NCBI-ProteinID: AGB10416
LinkDB
Position
1:2170625..2171266
AA seq 213 aa
MNKEKRIEILERLRENNPNPETELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPVANT
PQSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRDALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHHWLI
LHGRYTCLARKPRCGSCIIEDLCEYKEKVYPDS
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaacaaagaaaaaagaatagaaattcttgaacgattaagagaaaacaaccccaatcct
gaaacggaactgaactggagctctccatttgagttactcatcgctgtgctactttcagcg
caagcgaccgatgttagtgtaaacaaagccactgacaaactcttccccgttgcgaatacg
ccacaaagtattctcgatttgggtgtcgatggtttgaaggaatacatcaaaactattggc
ctgtttaactcaaaagcagaaaacaccatcaaaacctgtaagatcttattagaaaaacat
aatggcgaagtgcctgaagatcgcgacgctcttgaagctcttccaggagtcggccgtaag
accgccaatgtcgtgctcaacaccgcatttggttggccaaccattgccgtcgatacgcac
atttatcgcgtttcgaatcgtactaagtttgcgatgggaaaaacggtagatgatgtcgaa
caaaaactattaaaagtggtaccaaaagagttcaaactcgatgtacaccactggttaatt
cttcatggtcgctacacttgtttagcgagaaagcctcgctgtggaagctgcattattgaa
gatttgtgcgaatataaagagaaagtatacccagatagttaa

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