Vicugna pacos (alpaca): 102525287
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Entry
102525287 CDS
T08098
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102525287 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102525287 (TDG)
Enzymes [BR:
vpc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
102525287 (TDG)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102525287 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
102525287
NCBI-ProteinID:
XP_015096132
UniProt:
A0A6J0AKS9
LinkDB
All DBs
Position
12
AA seq
411 aa
AA seq
DB search
METENTGSYSLQQTQAFYTFPFQQVMAEVPNVTVMNEQEIPADVPAPAPAQEPIPETPKG
RKRKPRTTEPKKPVEPKKLAEAKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELL
TKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLSHMDDHT
LPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSK
EVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK
GIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYGENPCNSEPCSFLA
NGQTTHPAADNGESTFNDIPDGHWMTQSFTDQIPSFNNHCGTQEQEEGNHA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggaaaacacgggcagctactcccttcagcaaactcaagctttttacacattt
ccattccaacaagtgatggcggaagttcctaatgtgacagttatgaatgaacaagaaata
ccagcagacgttccagccccagctcctgctcaggaacccataccagagactccaaaagga
aggaaaagaaaacccagaacaacagaaccaaaaaaaccagtggaacccaaaaaactggct
gaggccaaaaagtctggcaagtccacaaaatcaaaagaaaagcaagaaaaaattacagac
acgtttaaagtgaaaagaaaagtagaccgcttcaatggtgtttcggaagctgaacttttg
accaagactctcccagacattttgaccttcaatctggacattgtgattattggcataaac
ccaggactaatggctgcttacaaagggcatcattaccctggacctggaaaccatttttgg
aagtgtctgtttatgtcagggctgagtgaggtccagctgagtcacatggatgatcacact
ttaccaggaaagtatggtattggatttaccaatatggtggaaaggacaacaccaggcagc
aaggatctctccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaattacag
aaatatcagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaag
gaagtttttggagtaaaggttaagaatttagaatttggacttcaaccccataagatccca
gacacagaaactctctgctatgttatgccatcatccagtgcaagatgtgcacagtttcct
cgagcccaggataaagttcattactacattaagctgaaggacttaagagatcagttgaaa
ggcattgaacgaaacacagacgttcaagaggtgcaatatacgtttgacctacagctagcc
caagaggatgcaaagaagatggctgtgaaagaagaaaaatacgatccgggttatgaagca
gcatatggtggtgcctatggtgaaaatccatgcaatagtgaaccttgcagcttccttgca
aatgggcagaccacccacccagcagctgacaatggagaatcaactttcaatgacattcca
gatgggcactggatgacccagtcgtttacagaccagattccttcctttaataatcactgt
gggacgcaagaacaggaagaaggaaaccatgcttaa
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