Vicugna pacos (alpaca): 102529253
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Entry
102529253 CDS
T08098
Symbol
SHARPIN
Name
(RefSeq) sharpin isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04217
Necroptosis
vpc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
102529253 (SHARPIN)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102529253 (SHARPIN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102529253 (SHARPIN)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
102529253 (SHARPIN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
102529253
NCBI-ProteinID:
XP_031546401
UniProt:
A0A6J3BPN6
LinkDB
All DBs
Position
25
AA seq
468 aa
AA seq
DB search
MAPPAGGAAAASDPGSTAVLLAVHAAVRPLGAGPEAEAQLRRLQLSADPERPGRFRLELL
GAGPGAVSLEWPLETVSYTVRGPSQHELQPPPGGPGTLSLHFANPQEAERWAALVRGATV
EGQNGNDSLPPALGPETGPVSLPSPLEVLTPKAPQPKVDLPWSSGDLMEKEELAGRLTRA
IEGGDEKGAAHAAALLAQHHVALSIQLREACFPPGPIRLQVTVEDAASSAHVSLQVHPHR
TIGALQEQVFSEFGFPPSVQRWVIGRRLCVPEYSLASYGVRRDGDPAFLYLLSAPREAPG
RNLQRPQKMEGELGRLFSQSLGLPRAPQPASSSLPNPIQPGWSCPSCTFINAPSRHGCEM
CSTQRPRAWEPFPTASTQQLPKQVPGPLDYVQPSQALFTCDQVLSAPTNAAASLTASSLP
PVPHPVLTGLPAMVRAVCRVMLATQHSTLLGALRARVPCTPVLPSYNS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccagcgggcggcgcggccgcggcttcggacccgggctcgactgcggtgctt
ctggcggtgcacgccgcggtgcggccgctgggcgcggggccggaggccgaggcgcagctg
cggaggctgcagctgagtgcggaccctgagcgaccagggcgcttccggctggagctgctg
ggcgcggggcccggtgcggtcagtttggagtggcccctggagacagtctcctacactgtc
agaggccccagccagcatgagctgcagcctccaccaggagggcctgggactctcagcctg
cacttcgccaaccctcaggaagctgagcggtgggcagccctggtccgaggtgccaccgtg
gaaggacagaatggcaatgacagcctgcccccagccctaggcccagaaacaggccctgtt
tccctgcccagtccccttgaagtgctcacacccaaggccccccaacccaaggtggatctt
ccctggagctctggagacttaatggagaaagaagagctggcagggcgcctgacccgggcc
atagagggtggggatgagaagggggcagcccatgcagcagctctcctggcccagcaccac
gtggccctgagtatccagctccgagaggcctgcttccctcctggccccatcagactacag
gtcacggttgaagacgctgcatcctctgcccatgtctcgctgcaggtccacccccaccgc
accatcggggccctccaggagcaggtgttctcggagttcggcttcccaccatctgtgcag
cgctgggtcattgggaggcgcttgtgtgtccctgagtacagcctcgcttcctatggggtc
cggcgggacggggaccctgctttcctctacctgctatcagccccccgagaagccccagga
cgcaatcttcagcgccctcagaagatggagggggaactaggccgtctgttttctcagtca
ctcgggcttccccgagcccctcaaccagccagctccagtctccccaacccgattcagccc
ggctggtcctgcccttcctgcactttcatcaacgccccaagccggcatggctgtgagatg
tgtagcacccagaggcctcgtgcttgggagccctttcccacagcctccacccagcagcta
ccaaagcaggttcctgggcccttggactatgttcagccaagccaggcccttttcacctgt
gaccaggtactctccgctccaacgaatgctgctgcttctctaacggctagttctctgcct
cctgtcccacatccagtactgactggactcccagccatggtccgtgcagtgtgcagggta
atgctggccacacagcacagcacactacttggagctctgagggcaagggtcccttgcaca
cctgtactcccatcatacaatagctga
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