KEGG   Vicugna pacos (alpaca): 102529953
Entry
102529953         CDS       T08098                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3G
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03250  Viral life cycle - HIV-1
vpc05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102529953
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102529953
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpc03019]
    102529953
Messenger RNA biogenesis [BR:vpc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102529953
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 MafB19-deam AID XOO_2897-deam
Other DBs
NCBI-GeneID: 102529953
NCBI-ProteinID: XP_031527701
UniProt: A0A6J3A4A4
LinkDB
Position
Unknown
AA seq 620 aa
MARARCLMDEHTFTHNFPNHKRTRKTYLCYEVEILCGDSGLPPDEDKGFLCNKGADQPGL
PCHVELYLLERIRSWNLDRKLHCRLTCFISWTPCGTCARKLAEFLKENSHVSLCIFASRI
YSLHDYEAGLRTLQEAGAQIAIMTFKEFKHCWETFVDHQGRPFQPWDELDVNSQGLSKEL
QAILQTRQTSLGGHLQMRALGEEMEPQRPRQRAGLGLASQGGCSQMPWISNLVEWIDPQT
FFFHFENLVYAYGRNRTYLCYQVKRKEHCSPVFPDKGVFHNKVNTPYHAELCFLSWFNKR
LSPDECYHVTWFVSWSPCVACAKQVAKFLEKNRNVRLSIFAARLYYFWQPAFQQGLCKLH
GVGAQVGIMSYQDFKYCWENFVYNQRMPFKPWEKLCENSKFLVTKLEEILRNTMSLLKED
IFNKQFSNQPRVTAPYYRRKTYLCYQLKGPDGSILAQGCLRNKKQRHAEIRFIDKIKFMN
LDPNQSYEIICYVTWSPCPTCAEKLVDLINDQVHLKLQIFASRLYFHWVRKYQIGLQYLW
ASQVTVAVMNRREFKDCWEKFVDNQGKEFQGWDKLEEYNRSISRRLHRILMQPLKQNNLE
DSFRDLRLGSPSPSSRSDSR
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggccagggccaggtgcctgatggatgaacacaccttcacccacaacttccctaatcat
aaaaggactcgcaagacctacctgtgctatgaggtggagatcctatgtggtgattctggg
ctccctccagacgaggacaagggcttcctgtgcaacaagggtgctgaccaacctgggctg
ccctgccacgtggagctgtacctcctggagcggatccgttcttggaatctggaccggaag
ctgcactgcaggctcacctgtttcatctcctggaccccctgtggtacctgtgcccggaaa
ctggctgaattcctgaaggagaacagccacgtgagcctgtgcatcttcgcctcccgcatc
tatagccttcacgattatgaggcagggctgcgcacactgcaggaggctggggcccaaatc
gccatcatgacctttaaggagttcaagcattgctgggagaccttcgtggaccaccaggga
agaccttttcagccctgggatgagctggatgtaaatagtcaaggcctaagtaaggagctg
caggccattctccagactcggcaaaccagcctgggaggtcacttacagatgagagccctg
ggagaggaaatggagccccagcgccccagacaaagggcagggctgggactagccagccaa
ggaggctgcagccagatgccctggatcagtaacctagtggagtggatagatccccaaacc
ttcttcttccactttgaaaacttggtgtatgcctatgggcggaaccgcacctacctctgc
taccaggtgaaaagaaaggagcactgctcacctgtcttccccgacaagggagtctttcat
aacaaggtcaatactccctaccatgccgaactctgcttcctctcttggttcaacaagagg
ctgtcccctgatgagtgttaccacgtcacctggtttgtgtcctggagcccctgcgtcgca
tgcgcaaagcaggtggctaagttcctggagaagaacaggaacgtgagactgagcatcttc
gctgcccgcctctactacttctggcaaccagcgttccagcaggggctgtgcaagctgcat
ggcgtgggggcccaggtgggcatcatgtcctaccaagactttaaatactgctgggaaaac
tttgtgtacaaccagagaatgcccttcaagccttgggagaaactatgtgaaaattctaag
ttcctggtcacaaagcttgaggagattctcaggaacacaatgagcctgctaaaggaagat
atattcaacaaacagttcagcaaccagccccgggtcacggcgccctactaccggaggaag
acttatttgtgctaccagttgaaggggcccgatggctccatacttgcccaaggctgcctc
cgaaacaagaaacagcgacatgcagaaattcgctttattgacaagatcaagtttatgaat
ctcgacccaaaccagagctacgaaatcatctgctatgtcacgtggagcccttgccccacc
tgtgccgagaaactggttgatttaatcaacgatcaagtccacctgaaactgcagatcttc
gcctcccgcctgtacttccactgggtcaggaagtatcagatagggctgcagtatctgtgg
gcttctcaggtcacagtggctgtcatgaaccgccgagagtttaaagactgctgggaaaag
tttgtggacaaccaggggaaggagttccagggctgggataagctggaggaatacaacaga
agcatcagccgacggctccacaggatcctgatgcagcccttgaagcagaataatttagag
gattccttcagagatttgagacttggatccccatcaccttcgtcaagaagtgactcaaga
tga

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