KEGG   Vicugna pacos (alpaca): 102533164
Entry
102533164         CDS       T08098                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
  KO
K06752  MHC class II antigen
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc04145  Phagosome
vpc04514  Cell adhesion molecules
vpc04612  Antigen processing and presentation
vpc04640  Hematopoietic cell lineage
vpc04658  Th1 and Th2 cell differentiation
vpc04659  Th17 cell differentiation
vpc04672  Intestinal immune network for IgA production
vpc04940  Type I diabetes mellitus
vpc05140  Leishmaniasis
vpc05145  Toxoplasmosis
vpc05150  Staphylococcus aureus infection
vpc05152  Tuberculosis
vpc05164  Influenza A
vpc05166  Human T-cell leukemia virus 1 infection
vpc05168  Herpes simplex virus 1 infection
vpc05169  Epstein-Barr virus infection
vpc05310  Asthma
vpc05320  Autoimmune thyroid disease
vpc05321  Inflammatory bowel disease
vpc05322  Systemic lupus erythematosus
vpc05323  Rheumatoid arthritis
vpc05330  Allograft rejection
vpc05332  Graft-versus-host disease
vpc05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102533164
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102533164
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    102533164
   04612 Antigen processing and presentation
    102533164
   04658 Th1 and Th2 cell differentiation
    102533164
   04659 Th17 cell differentiation
    102533164
   04672 Intestinal immune network for IgA production
    102533164
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    102533164
   05164 Influenza A
    102533164
   05168 Herpes simplex virus 1 infection
    102533164
   05169 Epstein-Barr virus infection
    102533164
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    102533164
   05152 Tuberculosis
    102533164
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    102533164
   05140 Leishmaniasis
    102533164
  09163 Immune disease
   05310 Asthma
    102533164
   05322 Systemic lupus erythematosus
    102533164
   05323 Rheumatoid arthritis
    102533164
   05320 Autoimmune thyroid disease
    102533164
   05321 Inflammatory bowel disease
    102533164
   05330 Allograft rejection
    102533164
   05332 Graft-versus-host disease
    102533164
  09166 Cardiovascular disease
   05416 Viral myocarditis
    102533164
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    102533164
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vpc04147]
    102533164
Exosome [BR:vpc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102533164
  Exosomal proteins of epithelial cells
   102533164
  Exosomal proteins of breast milk
   102533164
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 Ig_2 C2-set_2 ig
Other DBs
NCBI-GeneID: 102533164
NCBI-ProteinID: XP_006202269
UniProt: A0A6I9I5K3
LinkDB
Position
20
AA seq 263 aa
MTALLPLLLGLSLGCTGAGGFVAHVESSCLLDDDGTPEEFKYCISFNKDLLTCWDPLQAN
MVPCEFGVLHGLAKYLSDFLNRNENLIQRLSNGLQDCATHTQPFWKSLTHRTRPPSVQVA
KTTPFNTRESVMLACYVWDFYPADVIITWRKNGQPIFPHSSAENIAQPNGDWTYQTVSHL
ATTPSFGDTYTCVVEHISSPEPILQDWTPGLSPIQTVKVSVSAVTLGLGLIIFSLGLLSW
RRAASSGYIVLPGSVYPEGQHIS
NT seq 792 nt   +upstreamnt  +downstreamnt
atgacagccctcctgccgctgctgctgggcctcagcctgggctgcaccggagcaggtggc
tttgtggctcacgtggaaagcagctgtctgttggatgatgacgggacaccagaggagttc
aagtattgtatttccttcaacaaggatttgctgacctgctgggatcccctgcaggccaat
atggtcccttgtgaatttggggtgctgcatggcttggctaaatacctctcagatttcctc
aaccgaaatgaaaacctgatccagcgcttgtccaatgggcttcaggactgtgccacacac
acccagcccttctggaaatcactgacccacaggacacggccaccatctgtgcaagtagcc
aaaaccactccttttaacacgagggagtccgtgatgctggcctgctatgtgtgggacttc
tatccagctgatgtgatcatcacgtggaggaagaacgggcagccaatcttccctcacagc
agtgccgaaaatattgcgcagcccaatggagactggacgtaccaaacggtctcgcatttg
gctacaactccctcttttggggacacctacacctgtgtggtggagcacattagttctcct
gaacccatccttcaggactggactcctgggctgtccccaatccagacagtgaaggtttct
gtgtcagcagtgactctgggcctggggctcatcatcttctctctcggtttgctcagctgg
cggagagctgcctcctctggctacattgtcctcccagggtccgtttatccagaaggtcag
cacatttcctag

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