Vicugna pacos (alpaca): 102533376
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Entry
102533376 CDS
T08098
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04140
Autophagy - animal
vpc05014
Amyotrophic lateral sclerosis
vpc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102533376 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102533376 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
102533376 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102533376 (SMCR8)
Membrane trafficking [BR:
vpc04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
102533376 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
102533376
NCBI-ProteinID:
XP_006213884
UniProt:
A0A6I9IM00
LinkDB
All DBs
Position
16
AA seq
938 aa
AA seq
DB search
MISAPDVVAFTKEDEYEEEPYNEPALPEEYSVPLFPFASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPRRKSKGSDLCSRETEYTQDRPSQAATTSDPEESADTDRYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTDYFTQTLAQLSHIERMFRGDLCYLLTSQIDRA
LLKQQHVTNFLFEDFAEADDRAVVRQESAPAEPSQDRPPSRSLEKCPIPQVLISVGSYRS
SVESVLIKMEQELGDEEYKEVEGTESGSFDPQDNLKCQDMDMKGSISSGESIEVLGTEKD
TSVLFKSDSQGSLTVSLSPQVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSA
INEEESYADDGEGAIHFQVGTSPPEPGEAEEGSVENTPLQTDASCCIGKETRGSQVPLSP
PALTLSDEEGVVSTPPQRSRQKDQGFHVDFAMENSNLSSRDHSSEGFPAYELDPSHLLAS
RDSSKTSLDNYSDSTSCVSSAASTSSDRTPSSAHPTGPSSERHKKRAGQNALKFIRQYPF
AHPAIYSLLSGRTLVVLGEEEAMVRKLVTALSIFVPNYGCCAKPVKHWVSSPLHISDFQK
WKLIGLQRATSPAGTGALHALSRYSRYTSVLDLDRKTLRCPLYRGTLVPRLADRRTHIRR
GSTYYMHVQSVLAQLCAKAFLYTFCHHLHLPTRGQEVEAAAASRQASFLQLSLGLVNEDV
KVVQYLAELLRLHYTQEHPGAIQPTLRFDYVPSFLYKI
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccaaagaggacgagtacgaggaggagcct
tacaatgagccggccctgccggaggagtactccgtgccactctttcccttcgccagccaa
ggagccaatccgtggtccaaactgtccggggccaagttctctcgggactttatccttatt
tccgagttctctgagcaggtgggaccccagcccttgctgaccatccccaatgacaccaaa
gtttttggtactttcgatctcaattacttctctttgcggatcatgtctgtggattaccag
gcatccttcgtgggccatccccctggttctgcctaccccaagctgaacttcgtggaggac
tccaaggtcgtgttgggagactccaaagagggagcctttgcctatgtgcaccacctcacc
ctgtacgacctggaggcccgtggctttgttaggcccttttgtatggcttatatctcggcc
gaccagcacaaaatcatgcagcagttccaggagctttcggctgaattttccaaagcttca
gagtgcttaaaaacaggcaacaggaaggcatttgctggggaactcgagaagaaactgaaa
gacttggattacaccaggacagtgctgcacacggaaacggagatccagaagaaagccaat
gacaaaggcttttactcctctcaggccatcgagaaagccaacgagctggccagcgtggag
aagtccatcattgaacaccaggacttgctgaagcagatccgctcataccctcgtcggaag
tccaaggggtccgatttgtgttcccgggagacagagtacacccaggaccgtcccagccag
gcagccactacctctgaccctgaagagtccgctgacacagaccgatacacctgcagaccc
gcctacaccccgaaactcatcaaagcgaagtccaccaagtgttttgacaaaaagttgaaa
accctggaggagctctgtgacaccgactatttcacccagacgctggctcagctcagccac
attgagcgcatgttcagaggagacctgtgctacctcctgaccagccagatcgacagagcc
ctcctgaagcagcagcacgtgaccaactttctctttgaagactttgcagaggccgacgac
agggcggtagtgagacaggagagtgcacccgctgagcctagccaagataggccaccttcc
aggtctctggagaaatgcccaattccccaggtgttaattagcgtgggctcctacaggtcc
agcgtggagtctgtgctgatcaagatggagcaggagcttggtgatgaggagtacaaggaa
gtggagggaacagaatcgggcagttttgacccccaggacaacttgaaatgccaggacatg
gacatgaaagggagcatcagcagcggtgaaagcattgaggttctgggcaccgagaaggac
acctctgtgctattcaagtctgacagccagggcagcctgacggtgtccttgagcccgcag
gtggtccggagcaaagcagtcagccacagaaccatcagcgaggacagtattgaagtcctc
agcacctgcccttctgaggctctcatccctgacgattttaaggccagctacccaagtgcc
attaacgaggaagagtcatatgcggacgacggcgagggagccatccacttccaggtaggc
accagcccgccagagccaggggaggccgaggagggcagcgtggaaaacacaccgctgcag
acagatgcctcctgctgcatcgggaaggagaccaggggttcgcaggtgcccctctcccct
ccagccctcacactctctgacgaggagggggtcgtgagcacccccccacagcgctccagg
cagaaggaccagggcttccatgtggacttcgccatggaaaactccaacctttcttcccga
gaccacagttccgaaggcttccctgcctatgagctagacccaagccacctgctggccagc
cgggacagcagcaagaccagcctggacaactactcggacagcaccagctgtgtgagcagc
gccgcctccaccagctcggacaggacgccctcctccgctcaccccaccggcccctcttcc
gagaggcataagaagagggccggccagaacgccttaaagttcatccgccagtaccccttt
gcccacccggccatctactccctactcagcgggaggacacttgtggtgttgggggaggaa
gaggccatggtcaggaaactcgtgacagcattgtccatctttgtccccaactacggctgc
tgtgcgaaacctgtgaagcactgggtctcctctccgctgcatatttcggattttcagaag
tggaagcttattggcctgcagagagccacgtcccccgccggcaccggcgccctgcacgcc
ctgagccgctacagccgctacacgagcgtcctggacctggacaggaagacgctgcgctgc
cccctgtacagaggcaccctggtgccacggctggcagaccgccgcacccacatccggcgg
ggcagcacctactacatgcatgtgcagagcgtgctcgcccagctgtgcgccaaggccttc
ctctacaccttctgccaccacctgcatctgcccacccgcggccaggaggtggaggcggca
gccgccagccgccaggccagcttcctgcagctgagcctgggcctggtgaacgaagacgtc
aaggtggtccagtacctggccgagctgctgaggctgcactacacacaggagcaccccggg
gccattcagcccacgctcaggtttgactacgtccccagctttctgtacaaaatctga
DBGET
integrated database retrieval system
