Vicugna pacos (alpaca): 102533667
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Entry
102533667 CDS
T08098
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03272
Virion - Hepatitis viruses
vpc04144
Endocytosis
vpc04913
Ovarian steroidogenesis
vpc04925
Aldosterone synthesis and secretion
vpc04927
Cortisol synthesis and secretion
vpc04934
Cushing syndrome
vpc04976
Bile secretion
vpc04979
Cholesterol metabolism
vpc05145
Toxoplasmosis
vpc05160
Hepatitis C
vpc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
102533667 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102533667 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
102533667 (LDLR)
04925 Aldosterone synthesis and secretion
102533667 (LDLR)
04927 Cortisol synthesis and secretion
102533667 (LDLR)
09154 Digestive system
04976 Bile secretion
102533667 (LDLR)
04979 Cholesterol metabolism
102533667 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
102533667 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
102533667 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102533667 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
102533667 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102533667 (LDLR)
Membrane trafficking [BR:
vpc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
102533667 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
EGF_3
Psg1
Motif
Other DBs
NCBI-GeneID:
102533667
NCBI-ProteinID:
XP_006206357
UniProt:
A0A6I9I8P7
LinkDB
All DBs
Position
22
AA seq
849 aa
AA seq
DB search
MRPAGWGLRWAVALFLAAGSAAVEDRCGRNEFQCQDGKCISYRWVCDGTTECQDGSDESQ
DTCMSVTCKVGDFSCGGQVNRCIPGFWRCDGQVDCENGSDEEGCPPKTCSEDEFRCHDGK
CITLKFVCDSDLDCLDGSDEASCPPPTCGPASFQCNSSTCIPELWACDGEPECEDGSDEW
PERCGGRNTSATSEDNHPCSALEFHCRSGECIHSSWHCDGDPDCKDKSDEENCAEATCRP
DEFQCSDGACIHGSRQCDREYDCKDLSDELGCINVTLCEGPSKFKCQSGECISLDKVCNS
VRDCRDWSDEPLKECGTNECLDNKGSCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDEC
QDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKAVGTIAYLFFTNRHEVRKMTLDRSE
YTSLIPNLRNVVALDTEVASNRIYWSDLSHRKIYSAQIDRAPSFSSYDTVIGEDLQAPDG
LAVDWIHSNIYWTDSILGTVSVADTKGMKRKTLFQEKGSKPRAIAVDPVHGFMYWTDWGT
PAKIKKGGLNGVDIYSLVTEDIQWPNGIALDLSGGRLYWVDSKLHSISSIDVNGGNRRTV
LEDKKKLAHPFSLAIFEDKVFWTDIINEAIFSANRLTGSDINLMAENLLSPEDIVLFHNL
TQPRGVNWCERTALHNGGCQYLCLPAPQINPRSPKFTCACPDGLLLAKDMRSCLTETEPA
VTTRVSSTVRPRVGSTAEGPQRTASPELTTAELVTMTHQALGNAAGQLDEERPRSTGALY
IVLPIALLILLCFGTFLLWKNWRLRNINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQ
MVSLEDDVA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagacccgcgggctgggggctgcgctgggccgttgccctgttcctcgctgcggggtcg
gctgcagtggaagacagatgtgggagaaacgagttccagtgccaagatgggaaatgcatc
tcctacagatgggtttgcgacgggaccactgagtgtcaggatggctccgatgagtcccag
gatacgtgcatgtctgtcacctgcaaagtgggggacttcagctgtggaggccaggtcaac
cgctgcattcctggattctggagatgtgacgggcaggtggactgcgagaacggctcggat
gaggaaggctgtccccccaagacgtgctctgaggacgagttccgctgccatgacggaaag
tgcatcaccctcaagttcgtctgtgactcggacctggactgcctggacggctcagacgag
gcatcctgcccgccgcccacctgcggccctgccagcttccagtgcaacagctccacctgc
atccccgagctgtgggcttgcgacggtgaacccgagtgcgaggacgggtcggacgagtgg
ccagagcgctgcgggggccgcaacacgtccgccacctcagaggacaaccacccctgctcg
gccctcgagttccactgccgcagcggtgaatgcatccactccagctggcactgcgacggt
gaccctgactgcaaggacaagtctgatgaggagaactgcgccgaggccacctgccggccc
gacgagttccagtgctcggacggggcctgcatccacggcagccggcagtgcgacagggag
tatgactgtaaggacctgagcgacgagctgggctgcatcaacgtgactttgtgtgaggga
cccagcaagttcaagtgccagagcggcgagtgcatctccctggataaagtgtgcaactcg
gtccgggactgccgggactggtcagatgagcccctcaaggagtgcgggaccaatgagtgt
ctggacaacaagggcagctgctcccacatctgcaatgacctcaagattggctacgagtgc
ctgtgtcctgagggcttccagctggtggacaagcacagatgtgaagatattgacgagtgt
caggatcccgacgcctgcagccagatctgcgtgaacctggagggcagctacaagtgccag
tgtgaggagggcttccagctggagcccctcaccaaggcctgcaaggctgtgggcaccatc
gcgtaccttttcttcaccaaccgtcacgaggtgaggaagatgactctggaccgcagtgag
tacaccagcctcatccccaacttgaggaatgttgtcgccctggacacggaggtggccagc
aacagaatctactggtctgacctgtcccacaggaagatctacagtgcccagatcgacaga
gcccccagcttctcctcctatgacactgtcatcggcgaggatctccaggcccccgacggg
ctggcggtagattggatccacagcaacatatactggactgactccatcctgggcactgtc
tccgttgccgacaccaagggtatgaagaggaagacgctattccaggagaaaggctccaaa
ccccgggccatcgcggtggatcccgtccatggcttcatgtactggacggactggggaacc
cctgccaagatcaagaaggggggcctgaatggcgtggacatttactcgctggtgacagag
gacatccagtggcccaatggcatcgccctggatctttctggtggccgcctctactgggtc
gactccaagctccactccatctccagcatcgatgtcaacggggggaaccggaggaccgtc
ctggaagacaagaagaagctcgcacatcccttctccttggccatctttgaggataaagta
ttttggacggatattatcaacgaagccattttcagtgccaaccgcctcacaggctcagac
attaatctgatggcagaaaacctgttgtctccggaggacattgtccttttccacaacctc
acacagccgagaggggtgaactggtgtgagaggactgccctccacaacggtggctgccag
tacctgtgtctgccggccccgcagatcaacccacgctcacccaagttcacctgtgcctgc
cccgacggcctgctgctggccaaggacatgcggagctgcctcacagagactgaacctgca
gtgaccacccgggtgtcctccacagtcaggccgagggtcggctcgacagccgaggggccg
cagcgcacagccagccctgagctcaccacggccgagttggtgacgatgacccaccaagcc
ctgggcaacgctgctggccaactggacgaggagaggccccggagcacaggggccctgtac
atcgtcctccccattgcactgctcatcctcctgtgcttcgggaccttcctcctctggaag
aactggaggcttaggaacatcaacagcatcaactttgacaaccctgtgtaccagaagacc
acggaggacgaggtccacatctgccgcagccaggacggctacacctacccctcgagacag
atggtcagcctcgaggatgatgtggcgtga
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integrated database retrieval system
