Vicugna pacos (alpaca): 102535891
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Entry
102535891 CDS
T08098
Symbol
TAP1
Name
(RefSeq) LOW QUALITY PROTEIN: antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc02010
ABC transporters
vpc04145
Phagosome
vpc04612
Antigen processing and presentation
vpc05163
Human cytomegalovirus infection
vpc05168
Herpes simplex virus 1 infection
vpc05169
Epstein-Barr virus infection
vpc05170
Human immunodeficiency virus 1 infection
vpc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102535891 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102535891 (TAP1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
102535891 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102535891 (TAP1)
05168 Herpes simplex virus 1 infection
102535891 (TAP1)
05163 Human cytomegalovirus infection
102535891 (TAP1)
05169 Epstein-Barr virus infection
102535891 (TAP1)
09163 Immune disease
05340 Primary immunodeficiency
102535891 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpc02000
]
102535891 (TAP1)
Enzymes [BR:
vpc01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
102535891 (TAP1)
Transporters [BR:
vpc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
102535891 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
ABC_ATPase
AAA
AAA_22
AAA_29
AAA_25
AAA_23
AAA_5
SRP54
Zeta_toxin
AAA_30
AAA_15
APS_kinase
AAA_33
Motif
Other DBs
NCBI-GeneID:
102535891
NCBI-ProteinID:
XP_006202206
UniProt:
A0A6I9I309
LinkDB
All DBs
Position
20
AA seq
746 aa
AA seq
DB search
MAGSGSPALCGCLCLSRASLAWPGTTLLLLADWVLLRPALPQLSSLLVPPELPLLRVWVV
GLSRWAVLWLGARGVLRTAIGFQKEKAAVQGWLAALEPLAAALALALPGLASFRQLGSGD
ADSTQLLHWGSRLNAFALSYIAALPAAALWHKLRNLWEQKGHGDSGVAVRRLLGCLGSEI
RRLPLILILVLLSSLGEMAIPFFTGRLTDWILEDQAGAAFIQNITLMSILTIASAVLEFV
GDALYNSTMGXVHSHLQGEVFRAVLRQETEFFQKNQTGAITSRVTEDTSTVSESLSSDLS
LVLWYLVRGWCLLGLMLWASPFLTVVTLVILPLLFILPKKLGKWHKELAVQVQEALAKSS
EVAIEVLSAMFTVRSFANEEGEAQKFRQKLQEMKTLNQKEALAYAVDLWITSISGMLLKV
GILYFGGQLVTSGAVSSGHLVTFVLYQIQFTIAVEVLLSTYPRVQKAVGSSEEIFEYLDR
IPRCPTSGVLTSLNLGGVVQFQDVSFAYPNRPDVPVLQGLTFTLRPGEVMALVGPNGSGK
STVAALLQNLYQPTRGQVLLDGKPLPQYEHCYLHRQVAAVGQEPQLFGRSFQENIAYGLI
QKPTMEEITAVAKESGAHSFISELPHGYNTEVGEAGSQLSGGQRQAVALARALIRKPHVL
ILDDATSALDASSQARVEQLLYESPERYSRSVLFITQRLSSVEKADHILFLEGGTIIEAG
THQQLMENKGRYCTMVQAPGGSGGPE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggccggctcggggtcccccgcactctgcgggtgtctctgcctctcccgagcttccctc
gcctggcctgggaccacgctgctgcttctcgccgactgggtgctgctccggccggccctg
ccccagttgtcctccctgctggtgcctcctgagttgccgctgctccgggtctgggtggtg
ggcctgagccgctgggctgtgctgtggctcggggcccgcggggtcctcaggacagcgatt
ggctttcagaaagaaaaagcagcagtccaaggatggctggctgctttggagccactggcg
gcggcgctggccttggccctgccgggacttgcctcgttccgtcagctgggatcgggggac
gcagacagcacccagctcctgcactggggaagtcgcctcaacgccttcgccctcagctac
atagcagcactgcccgcggctgccctgtggcataaactcaggaacctttgggaacaaaaa
ggtcacggggattctggagtggcggtgaggcggcttctgggctgcctgggctcagagata
cgccgcctcccgctcattctaatcctggtgctcctctccagtcttggggagatggctatt
ccattcttcacgggccgtctcactgactggattctagaagaccaggcaggcgctgccttc
attcaaaacataactctcatgtccatcctcaccatagccagtgcagtgctagagtttgtg
ggcgatgcactctacaacagcaccatgggcnccgtgcacagccacttacagggagaggtg
tttcgggccgtcctgcgccaggaaactgagttttttcaaaagaaccaaacaggtgccatc
acatctcgggtgacagaggacacgtccaccgtgagtgagtctctgagttcggacctgagc
ctcgtgctgtggtacctcgtgaggggatggtgtctcttggggcttatgctctgggcgtca
ccattcctcactgtggtcaccctggtcatcctgccactgcttttcattctgcctaagaag
ctgggaaaatggcacaaggagctggcagtgcaggtgcaggaagctctggcaaagtccagc
gaggtggccattgaggttctgtcagcgatgtttacagtccggagctttgccaacgaagag
ggtgaggcccagaagttcaggcaaaagctgcaggaaatgaagacactcaaccagaaggag
gccctggcctatgcggtcgatctctggatcaccagtatctcagggatgctactgaaggtg
ggaatcctgtatttcggcgggcagctggtgacaagtggggctgtgagcagtgggcacctt
gtcacatttgttctgtaccagatccagtttaccatagctgttgaggtactgctgtccacc
taccccagggtacagaaggctgtgggctcctcagaggaaatatttgaatacctggaccgg
atccctcgctgcccaacaagtggtgtattgacttccttaaacctcgggggcgttgtccag
ttccaggatgtctccttcgcttaccctaaccgtccggacgtcccggtgctgcaggggctg
acattcaccctacgtcctggtgaagtgatggcactggtggggcccaatgggtctgggaag
agcacggtggctgccctgctgcagaatctgtaccagcccaccagggggcaggtgctgctg
gatgggaagccccttccccaatatgagcactgctacctgcacagacaggtggctgcagtg
ggacaggagccccagctatttggaagaagttttcaagaaaatattgcctatggcctgatc
cagaagccaactatggaggaaatcacagctgtcgcaaaggagtctggagcccatagtttc
atctctgaactccctcacggctacaacacagaggtaggtgaggctgggagccagctatca
gggggtcagcggcaggcagtggccttggctcgagcactgatccggaaaccacatgtactc
atcctggatgatgcgaccagtgccctagatgcaagcagccaggcacgggtggagcagctc
ctgtatgaaagccctgaaaggtactctcggtctgtgcttttcatcacccagcgcctcagc
tctgtggagaaggctgaccacatcctctttcttgaaggaggcaccatcattgaggcggga
acccaccagcagctcatggagaataagggacgctattgtaccatggtgcaggctcctggt
gggtctggtggtccggaatga
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