Vicugna pacos (alpaca): 102540146
Help
Entry
102540146 CDS
T08098
Name
(RefSeq) protocadherin gamma-C5 isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102540146
Cell adhesion molecules [BR:
vpc04515
]
Cadherins
Protocadherins
102540146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
PepSY
Motif
Other DBs
NCBI-GeneID:
102540146
NCBI-ProteinID:
XP_006204586
UniProt:
A0A6I9I6E1
LinkDB
All DBs
Position
3
AA seq
949 aa
AA seq
DB search
MDFWVMGPKTAPQLAGKWQVLCMLSLCCWGWVSGQLRYSVVEESEPGTLVGNVAQDLGLK
VTDLLSRRLRLGSEENGHYFSLSLRSGALAVNQKIDRERLCGASTSCLLPVQVVTEHPLE
LIRVEVEILDLNDNSPSFATPEREIRISESAALGARFPLDSAQDPDVGTNTVSFYTLSPS
SHFSLNVKTLKDGKLFPELVLEQQLDREAQARHQLVLTAVDGGVPARSGTTLISITVLDI
NDNAPAFQSSVLRVALPENTPMGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGL
DPSSGAIHVFGPIDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASL
VNPVLESTPVGTVVGLFNVRDRDSGRNGEVSLDISPDLPFQIKPSENHYSLLTSQPLDRE
ATSHYIIELQAHDAGLPPLHAHLTIRLNISDVNDNAPYFTQQLYTAYIPENRPPGSLLCT
VAASDPDTGDNARLTYSIVGNQIRGAPASSFVYVNPEDGRVFAQRTFDYELLQMLQIVVG
VRDSGSPPLHANTSLHVFVLDQNDNAPAVLHPIPGRELSIPQRLPRSAPPGSLVTKVTAV
DADAGHNAWLSYSLLPQSTAPGLFLVSAHTGEVRTARALLEDDSDTQQVVVLVRDNGDPS
LSSTATVLLILEDEDPEEMPKSRDFLIHPPERSDLTLYLIVALAAISLLSLVTFTFLSAK
CLRGHADGDGGGGQCCRRQDSPSREFYTQSSPNLQVSSDGTLKYMEVTLRPTDSHSHCYR
TCFSPASDGSDFTFLRPLSIQQPSALAPEPDAFRSRSNTLLERSQQAPPNTDWRFSQAQR
PGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQF
TLQHVPDYRQNVYIPGSNATLTNAAGKRDGKTPASGNGNKKKSGKKEKK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggacttctgggtcatggggcccaagacagccccacagctcgctgggaaatggcaagtg
ctgtgcatgttgtccttgtgctgctggggctgggtgtctgggcagctgcgttactcagtg
gtggaggagtctgaaccggggacgctggtggggaatgttgctcaggatctcggcttaaag
gtgacagatctgttgagccgccgactgcggttgggctctgaggagaatgggcactatttt
tccctgagcttgaggagcggtgctctggcagtaaatcagaaaattgaccgagagagactg
tgtggagccagcaccagctgcctgctgccagtacaggtggtgactgaacaccccctggaa
ttaatccgtgtagaggtagagatcctggatctcaatgacaactctcctagctttgccact
cctgagcgagagatacgcatctcagaatcagctgcacttggggcacgattcccactggat
agtgcccaggatccagacgtgggcaccaatactgtgagcttctatactctaagccccagc
agccacttctctctgaatgtgaagaccctaaaagatgggaagctgttcccagagctggtg
ctcgagcagcagctggaccgtgaagcccaggcaagacatcagctggtgctcactgctgtg
gacgggggtgtcccagcccgctcagggaccacccttatctctatcactgtgctggacatc
aatgataatgctccagccttccagtcctcagttctccgtgtagcactcccagagaataca
cccatgggtacactgctgctccgcctcaatgccactgacccggatgagggcaccaatggc
caactagactattcttttggagaccatacatctgaggcagtgcggaatctctttggccta
gaccctagcagtggagcaatccatgtgtttggtcccatagactttgaggagtcaagtttc
tatgaaattcatgcaagagcccgtgaccagggacagccagccatggaaggccactgtgtg
attcaagtggatgtgggggatgccaatgacaatgcccctgaggtactgctggcctctttg
gtcaaccctgtcctggagagcacaccagtgggcacagtggtgggattgtttaacgtgcgg
gaccgagactcagggagaaatggtgaagtgagcctggatatctctccggacctcccattt
cagattaagccttctgagaaccactactcactgctaaccagccagcctttggaccgtgag
gccacatcccactatatcattgagctgcaggcccacgatgcgggcttacctcccttgcac
gcacatctcaccatcagactcaacatttcagatgttaacgacaatgcaccctacttcacc
cagcagctctatactgcttacatcccagaaaaccgacctccaggctcccttctctgcacc
gtggctgcctctgatccagacactggggataatgcccgcctcacctactccattgtaggg
aaccagattcggggagccccagcctcctccttcgtatatgtcaaccctgaggacgggcgg
gtctttgcccagcgtacctttgactatgagttactgcagatgctgcagatcgtggtgggc
gttcgagactctggttctcccccactgcacgctaacacatctctccatgtgtttgtcctg
gaccagaatgataatgccccagccgtgctgcacccgatacccggccgggaactctcaatc
ccccagcgtcttcctcgctcagcccctcctggctccttggtcaccaaggtgacagccgta
gatgctgatgcaggccacaatgcatggctctcctattcactgttgccacagtccacagcc
ccgggactgttcctggtgtctgcacacactggtgaggttcgaacagcccgggctttactg
gaggatgactctgacacacagcaggtggtggtcctagtgagggacaatggtgacccttca
ctctcctctacagccacagtgctgctgattctggaggatgaggaccctgaggaaatgccc
aaatccagggacttcctcattcaccctcctgagcgttcagaccttacactttacctcatt
gtggctcttgcagccatcagcctcttatccttagtcactttcacctttctgtcagctaag
tgccttcgggggcatgcagatggggatgggggtgggggccagtgctgcaggcgccaggac
tcgccctctcgggagttctacacgcagtccagccccaatctacaagtgagctcagacggc
acgctcaagtacatggaggtgacgctgcggcccacagactcccacagccattgctaccgg
acgtgcttttcaccagcctcggatggcagtgacttcacttttctaaggcccctcagcatc
cagcagccctcagctctggcgccggagcctgacgccttccggtcccgctctaacacgttg
ctcgagcggagccagcaagccccacccaacacggactggcgtttctctcaggcccagaga
cccggcaccagcggctcccaaaatggcgatgaaaccggcacctggcccaacaaccagttt
gacacagagatgctgcaagccatgatcttggcctccgccagtgaagctgctgatggaagc
tccaccctgggagggggcgccggcaccatgggcctcagtgcccgctacgggccccagttc
accctgcagcacgtgcccgactaccgccagaatgtctacatccccggcagcaatgctact
ctgaccaacgcagctggcaagcgagatggcaagaccccggcaagtggcaacgggaacaag
aagaagtcgggcaagaaggagaagaagtaa
DBGET
integrated database retrieval system
