KEGG   Vicugna pacos (alpaca): 102540243
Entry
102540243         CDS       T08098                                 
Symbol
IFNB1
Name
(RefSeq) interferon beta
  KO
K05415  interferon beta
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc04060  Cytokine-cytokine receptor interaction
vpc04151  PI3K-Akt signaling pathway
vpc04217  Necroptosis
vpc04380  Osteoclast differentiation
vpc04620  Toll-like receptor signaling pathway
vpc04621  NOD-like receptor signaling pathway
vpc04622  RIG-I-like receptor signaling pathway
vpc04623  Cytosolic DNA-sensing pathway
vpc04630  JAK-STAT signaling pathway
vpc04650  Natural killer cell mediated cytotoxicity
vpc04668  TNF signaling pathway
vpc04936  Alcoholic liver disease
vpc05135  Yersinia infection
vpc05142  Chagas disease
vpc05152  Tuberculosis
vpc05160  Hepatitis C
vpc05161  Hepatitis B
vpc05162  Measles
vpc05163  Human cytomegalovirus infection
vpc05164  Influenza A
vpc05165  Human papillomavirus infection
vpc05167  Kaposi sarcoma-associated herpesvirus infection
vpc05168  Herpes simplex virus 1 infection
vpc05169  Epstein-Barr virus infection
vpc05170  Human immunodeficiency virus 1 infection
vpc05171  Coronavirus disease - COVID-19
vpc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    102540243 (IFNB1)
   04668 TNF signaling pathway
    102540243 (IFNB1)
   04151 PI3K-Akt signaling pathway
    102540243 (IFNB1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102540243 (IFNB1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    102540243 (IFNB1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    102540243 (IFNB1)
   04621 NOD-like receptor signaling pathway
    102540243 (IFNB1)
   04622 RIG-I-like receptor signaling pathway
    102540243 (IFNB1)
   04623 Cytosolic DNA-sensing pathway
    102540243 (IFNB1)
   04650 Natural killer cell mediated cytotoxicity
    102540243 (IFNB1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    102540243 (IFNB1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102540243 (IFNB1)
   05161 Hepatitis B
    102540243 (IFNB1)
   05160 Hepatitis C
    102540243 (IFNB1)
   05171 Coronavirus disease - COVID-19
    102540243 (IFNB1)
   05164 Influenza A
    102540243 (IFNB1)
   05162 Measles
    102540243 (IFNB1)
   05168 Herpes simplex virus 1 infection
    102540243 (IFNB1)
   05163 Human cytomegalovirus infection
    102540243 (IFNB1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    102540243 (IFNB1)
   05169 Epstein-Barr virus infection
    102540243 (IFNB1)
   05165 Human papillomavirus infection
    102540243 (IFNB1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    102540243 (IFNB1)
   05152 Tuberculosis
    102540243 (IFNB1)
  09174 Infectious disease: parasitic
   05142 Chagas disease
    102540243 (IFNB1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    102540243 (IFNB1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    102540243 (IFNB1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:vpc04052]
    102540243 (IFNB1)
Cytokines and neuropeptides [BR:vpc04052]
 Cytokines
  Interferons
   102540243 (IFNB1)
SSDB
Motif
Pfam: Interferon PDDEXK_10 Benyvirus_14KDa Mer2
Other DBs
NCBI-GeneID: 102540243
NCBI-ProteinID: XP_006208320
UniProt: A0A6I9IE84
LinkDB
Position
4
AA seq 186 aa
MIDRCILQIALLLCFSTAALSVNYNLLRYQQRSSNLACKNLLRQMPGIPQYCLEDRMDFD
VPEEIKQPQQFQKEDAVLVIYEMLQQIFGIFRRDFSSTGWNKAIIQDLLVEIDVQIDHVE
TILVEIMKEKNFTRGDMTILHLKMYYLKIVQYLKSKEYSGCAWTVVQAEILRNFSFLNSL
TECLQD
NT seq 561 nt   +upstreamnt  +downstreamnt
atgattgacaggtgcatcctccaaatcgctctcctattgtgtttctccaccgcagctctt
tccgtgaactacaacttgcttcggtaccaacaaaggagcagcaacttggcatgtaagaat
ctcctgcggcagatgcctggaatccctcagtattgccttgaggacaggatggactttgac
gtccctgaggagattaagcaaccccagcagttccagaaggaagatgccgtattggtcatc
tatgagatgctccagcagatctttggtattttcagaagagatttctcaagcactggctgg
aataaggccatcattcaggacctccttgtagaaatcgatgtgcagatagaccatgtggag
acaatcctggtggaaataatgaaggagaaaaacttcaccaggggagacatgaccattctt
cacctgaagatgtattacttaaagatcgtgcagtacttgaagtccaaggagtacagcggc
tgtgcctggacagtagtccaagcggaaatcctcaggaatttttccttccttaacagtctt
acagaatgccttcaggactga

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