Vicugna pacos (alpaca): 102540736
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Entry
102540736 CDS
T08098
Name
(RefSeq) uncharacterized protein LOC102540736
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc00510
N-Glycan biosynthesis
vpc00513
Various types of N-glycan biosynthesis
vpc00514
Other types of O-glycan biosynthesis
vpc00515
Mannose type O-glycan biosynthesis
vpc00533
Glycosaminoglycan biosynthesis - keratan sulfate
vpc00601
Glycosphingolipid biosynthesis - lacto and neolacto series
vpc01100
Metabolic pathways
Module
vpc_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
vpc_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
102540736
00513 Various types of N-glycan biosynthesis
102540736
00515 Mannose type O-glycan biosynthesis
102540736
00514 Other types of O-glycan biosynthesis
102540736
00533 Glycosaminoglycan biosynthesis - keratan sulfate
102540736
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
102540736
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vpc01003
]
102540736
Enzymes [BR:
vpc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
102540736
2.4.1.90 N-acetyllactosamine synthase
102540736
Glycosyltransferases [BR:
vpc01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
102540736
Glycolipid
102540736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Ig_3
ig
V-set
Ig_2
I-set
C2-set_2
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
102540736
NCBI-ProteinID:
XP_031537377
LinkDB
All DBs
Position
11
AA seq
642 aa
AA seq
DB search
MLVRFVSCVRLRKSRMEQQRGLLLFLGVQMLLVGALLYQSHHRRSFTSFLRSLIQDKPED
GEELPFLVQVSSVGIPYQDVYSNLSQIHPLDISDEDLPNCPIISPYINGPLKVLIPENLT
MEQVVEKNPLVELGGQYRPPDCWTEQHTAVVVPYCGQGRQLQQLLFHLHPFLQRQQLHYA
VYVVNQVNNSPFNRGKLCNVGFWEAMQEEDWDCVFFHDVNLLPEDDCNRYVCDVFPAHVS
VAIDKFNYKLPYQGYLGGVFALRPIHYLRINGFPNTYWGWDQEDNEIAARVKLSGMLLSR
PHLLFGRYHMLEEGQYPSHKQSPQRGTPEGRLSGGTRKRCAFYNCCCCLCCGEKGADITH
DPPVATNKPEQKLHERTRGRFFLLGDFWTKNCSLSIRDVSMEDSGTYFFHVETSFSKHSY
LDKMFSLKVTALIHKPHIPIPETLESGCPRNLTCSVPWACEQGTPPIFSWTSAALTSLGP
KTLLSSVLTLTPRPQDHSTTVTCQVMFPTTGVIVERTIQLNVTYAPQNVAISIFQGNRPA
LETLQNASSLPILEGQALQLLCVADSNPPAQLSWFRGSLSLSPCQPLDPGVLELPHVVLG
DGGEFTCRTQHPGSSHCVSLNLVVQGECKQGCLGSELGREKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctagtccggttcgtgtcctgtgtgcgcctgcgcaaaagcagaatggaacagcagagg
gggctcctgttgtttctgggggtacagatgctgctggtgggggcattgctctaccaaagc
caccaccgccgtagcttcacctccttcctgcgctccctaatacaagacaagccagaggat
ggagaagagctgccttttctggttcaggtctcctctgtaggaatcccttaccaggatgtg
tactccaacctcagccagattcaccccctggacatcagtgatgaggatctgcccaactgt
cccatcatctcgccctacatcaatggtcctttgaaggtgctgatcccagagaacctgacg
atggagcaggtggtggagaagaacccactggtggagctgggaggccagtaccggccaccc
gactgctggacagagcagcacacggcggtcgtggtgccctactgtgggcaaggccggcag
ctgcagcagctgctcttccacctgcaccccttcctgcagcgccagcagctgcactacgcc
gtctacgtggtgaaccaggtgaacaacagccccttcaaccggggcaagctgtgcaacgtg
gggttctgggaggccatgcaggaggaggactgggactgtgtcttcttccacgatgtgaac
ctcctcccggaggacgactgcaaccgctacgtctgtgacgtcttccctgcccatgtgtcc
gtggccattgacaagttcaactacaagctgccctaccagggctatcttggaggggtgttt
gctctgcgccccattcactacctgaggataaacggtttccccaacacgtactggggctgg
gatcaggaggacaatgagatcgctgccagggtgaagctcagtgggatgctcctttcccgg
ccccacctgctctttggccgctaccacatgctggaggaggggcagtaccccagccacaag
cagagcccccagagagggactccagaaggcagactgtctgggggcacgaggaagagatgt
gccttctacaactgctgctgctgcctgtgctgtggggagaaaggggcagatataacacat
gatcctccagtggccaccaacaagcccgaacagaagctgcatgaaaggactcgggggcgg
ttctttctcctcggggacttctggaccaaaaactgctccctgagcatcagagacgtcagc
atggaggacagtgggacatacttctttcacgtggagacatccttcagtaaacactcatat
ctagataaaatgttctctctgaaggtgacagctctgatccacaaaccccacatccccatc
ccggagaccctggagtctggctgccccaggaacctgacctgctcggtgccctgggcctgt
gagcagggcacaccccccatcttctcctggacatcagctgccctcacctccctgggcccc
aagaccctcctctcctcagtgctcaccctcaccccacggccccaggaccacagcacaact
gtcacctgtcaggtgatgttccccacaactggggtgatcgtggaaaggaccatccagctc
aacgtcacctatgctccacagaacgtggccatcagcatcttccaaggaaacagaccagcc
ctcgagactctgcaaaatgcctcatcccttcccatcctggagggccaggctctgcagctg
ctctgtgttgctgacagcaacccacctgcccagctgagctggttccgtggaagcctgtcc
ctgagcccctgccagcccttggatcccggggtcctggagctgccccacgtggtcttagga
gatggaggagaattcacctgccgaactcagcacccggggagctcccactgtgtctccctg
aacctggttgtacagggtgagtgtaagcaaggatgcctgggctctgagctgggccgtgag
aaggattaa
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