Vicugna pacos (alpaca): 102543069
Help
Entry
102543069 CDS
T08098
Symbol
KDM2A
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102543069 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102543069 (KDM2A)
04121 Ubiquitin system [BR:
vpc04121
]
102543069 (KDM2A)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102543069 (KDM2A)
Enzymes [BR:
vpc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102543069 (KDM2A)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102543069 (KDM2A)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102543069 (KDM2A)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102543069 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102543069 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
102543069
NCBI-ProteinID:
XP_031546808
UniProt:
A0A6J3BM43
LinkDB
All DBs
Position
25
AA seq
1151 aa
AA seq
DB search
MIMRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGKDFNVEYIQRGG
LRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQWTRYYE
TPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILEM
QYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSG
KQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKI
YNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLSMDLELNGLESG
NVDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKTLSGDSSSDSSR
GSHNGQVWDPQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIAD
VKILLEELANSDPKLALTGVPIVQWPKRDKLKFPARPKVRVPTIPITKPHTMKPAPRLTP
VRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQCLA
PRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWE
CPKCYQEDNSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPTSMLQLIHDPAS
PRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEK
AKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHCPARTPQRGDEE
GLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMSVFRYLSRRELC
ECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLSWTNISKKQLTW
LVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPADKPG
QDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSS
TRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHFISDLSINSLYC
LSDEKLIQKIS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgcgtggtaccatgcgacgacgctatgaagatgatggcatttcagatgatgaa
attgaagggaaaagaacttttgacttggaagagaaactccacaccaacaaatataatgca
aattttgttacttttatggaaggaaaagattttaatgtagagtatatccagcggggtggc
ttaagagaccctctgattttcaagaattccgatggacttggaataaagatgccagatcca
gacttcactgtgaatgatgtcaaaatgtgtgtggggagtcgtcgtatggtggatgtcatg
gatgtgaacacacagaaaggcattgaaatgaccatggctcagtggacacgctactatgag
accccagaggaggagcgagaaaaactctataatgttatcagcctagagtttagccacacc
aggctggagaacatggtgcagaggccctccacggtggattttattgactgggtagacaac
atgtggccaaggcatttgaaggaaagtcagaccgaatcaacaaatgccatcctggagatg
cagtaccctaaagtgcagaagtactgtctgatgagtgttcgaggctgctataccgacttc
catgtggactttggtggtacctctgtgtggtatcacatccatcaagggggaaaggtcttc
tggctcatcccccctacagcccacaacctggagctgtacgagaattggctgctgtcaggg
aaacagggagacatctttctgggtgaccgggtgtcagattgccagcgcatagagctcaag
cagggctatacattcgtcattccttcaggctggattcatgctgtgtatactcctacagac
acgttagtgtttggaggcaattttttgcatagcttcaatatccccatgcagttaaaaata
tacaacattgaagatcggacacgggttccaaataagttccgctatccattctactatgag
atgtgttggtacgtgttggagcgctacgtgtactgcataaccaaccgctcccacctaact
aaggagtttcagaaagagtccctgagcatggatttggagttaaatgggttggagtctgga
aatgtggatgaggaagcagtggatcgagaaccccggcgcttgagcagtagacgttctgtc
ctcactagccctgtagccaatggggtcaacctggattatgatggactaggcaaaacctgc
cgaagtcttccaagtctgaagaaaactttgtctggggactcgtcctctgactctagccgg
ggttcccacaatggccaagtgtgggatccccagtgtagcccccgaaaggataggcaggtg
catctgacccactttgagcttgaaggccttcgttgccttgtagataaattggaatctctg
ccgctgcacaagaaatgtgtccccacagggatagaagatgaagatgctctcattgctgat
gtaaagattttgctcgaggagcttgccaacagtgatcccaagttagccctcactggagtc
cctatagtacagtggccaaaaagggataagcttaaattcccagcccggccaaaggtgcgg
gttcctaccatccccatcacaaagcctcacactatgaaaccagctccacggctaacacct
gtgaggccagcagctgcctcccccatagtgtctggagccaggcggagacgagtgcgatgt
cgaaaatgcaaagcctgtgtgcagggagagtgtggtgtttgccactactgcagggacatg
aagaagttcggggggcctggtcgcatgaagcagtcctgtgtcctccgacagtgcttggca
cctagactgcctcactcagtcacgtgttccctctgtggagaggtagatcaaaatgaggag
acacaggactttgagaagaaactcatggaatgctgtatctgcaatgagattgttcatcct
ggctgcctccagatggatggagagggattgctcaacgaggaattgccaaattgctgggag
tgtccaaagtgctaccaggaagacaactcagagaaagcccagaagcggaaaatggaagag
agtgatgaagaagccgtgcaagccaaagtcctgcggcccctgcggagctgcgatgagccc
ctcacgcccccgcctcactcgcccacctccatgctgcagctcatccatgacccggcctcc
ccccggggcgtggtgactcggtcatctcctggggccggccccagcgaccaccacagtgcc
agccgcgatgagcgcttcaaacggcggcagttgctgcggctgcaggccacagagcgcacc
atggtacgggaaaaggagaacaatcccagcggcaaaaaggagctgtctgaagttgagaaa
gccaagatccggggatcgtacctcactgtcacgctgcagaggcccaccaaagagctccac
gggacatccattgtgcccaagctgcaggccatcacggcctcctctgccaaccttcgccat
tccccccgtgtgctagtgcagcactgcccagcccgaaccccccagcgtggggatgaggag
gggctggggggagaggaggaggaagaggaggaggaggaggaggaagatgacagtgcagag
gaggggggtgcagccaggctgaatggccggggcagttgggctcaggatggagacgaaagc
tggatgcagcgggaggtctggatgtctgtcttccgctacctcagccgcagagaactttgt
gaatgtatgcgagtgtgcaagacgtggtataaatggtgctgcgacaagagactttggaca
aaaattgacttgagcaggtgtaaggcaattgtaccccaggctctcagtggcatcatcaag
aggcagccagttagcctcgacctcagttggaccaacatctccaaaaaacaactgacgtgg
ctcgtcaataggctgccaggactgaaagatctcctcctagcaggctgttcctggtctgca
gtctctgccctcagcacctccagctgcccccttctcaggacccttgatcttcggtgggca
gtaggaatcaaagaccctcaaattcgggacttgctgactccaccagctgataaaccgggt
caggacaatcgcagcaagctccggaacatgaccgacttccggctggcaggccttgacatc
acagatgccacgcttcgcctcatcattcgccacatgcccctcctgtctcgactcgacctc
agtcactgcagtcacctgacagatcagtcctccaatctgctcactgctgtcgggtcttcc
actcgttactccctcacagagctcaacatggcaggttgcaataaactgacagaccagacc
ctgatctacctacggcgcatcgccaatgtcaccttgattgaccttcgaggatgcaagcag
atcactcgaaaagcctgcgagcacttcatctcagacctgtccatcaacagtctctactgc
ctgtctgacgagaagctgatacagaagatcagctaa
DBGET
integrated database retrieval system
