Vicugna pacos (alpaca): 102545797
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Entry
102545797 CDS
T08098
Symbol
RB1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc01522
Endocrine resistance
vpc04110
Cell cycle
vpc04218
Cellular senescence
vpc04934
Cushing syndrome
vpc05160
Hepatitis C
vpc05161
Hepatitis B
vpc05163
Human cytomegalovirus infection
vpc05165
Human papillomavirus infection
vpc05166
Human T-cell leukemia virus 1 infection
vpc05167
Kaposi sarcoma-associated herpesvirus infection
vpc05169
Epstein-Barr virus infection
vpc05200
Pathways in cancer
vpc05203
Viral carcinogenesis
vpc05207
Chemical carcinogenesis - receptor activation
vpc05212
Pancreatic cancer
vpc05214
Glioma
vpc05215
Prostate cancer
vpc05218
Melanoma
vpc05219
Bladder cancer
vpc05220
Chronic myeloid leukemia
vpc05222
Small cell lung cancer
vpc05223
Non-small cell lung cancer
vpc05224
Breast cancer
vpc05225
Hepatocellular carcinoma
vpc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102545797 (RB1)
04218 Cellular senescence
102545797 (RB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102545797 (RB1)
05207 Chemical carcinogenesis - receptor activation
102545797 (RB1)
05203 Viral carcinogenesis
102545797 (RB1)
09162 Cancer: specific types
05212 Pancreatic cancer
102545797 (RB1)
05225 Hepatocellular carcinoma
102545797 (RB1)
05226 Gastric cancer
102545797 (RB1)
05214 Glioma
102545797 (RB1)
05220 Chronic myeloid leukemia
102545797 (RB1)
05218 Melanoma
102545797 (RB1)
05219 Bladder cancer
102545797 (RB1)
05215 Prostate cancer
102545797 (RB1)
05224 Breast cancer
102545797 (RB1)
05222 Small cell lung cancer
102545797 (RB1)
05223 Non-small cell lung cancer
102545797 (RB1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102545797 (RB1)
05161 Hepatitis B
102545797 (RB1)
05160 Hepatitis C
102545797 (RB1)
05163 Human cytomegalovirus infection
102545797 (RB1)
05167 Kaposi sarcoma-associated herpesvirus infection
102545797 (RB1)
05169 Epstein-Barr virus infection
102545797 (RB1)
05165 Human papillomavirus infection
102545797 (RB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
102545797 (RB1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
102545797 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vpc01009
]
102545797 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102545797 (RB1)
Protein phosphatases and associated proteins [BR:
vpc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102545797 (RB1)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
102545797 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
RuvC_1
TFIIB
Motif
Other DBs
NCBI-GeneID:
102545797
NCBI-ProteinID:
XP_006220289
UniProt:
A0A6I9ISY5
LinkDB
All DBs
Position
14
AA seq
888 aa
AA seq
DB search
MFSFGRLEFEETEEPDFTALCQKLKVPDHVRERAWLTWEKVSSVDGVLEGYIQKKKELWG
ICIFIAAVDLDEMPFTFTELQKSIETSVYKFFDLLKEIDTSTKVDNAMSRLLKKYNVLCA
LYSKLERTCELIYLAQPSSSISTEXNSMLVLKVSWITFLLAKGEVLQVEDDLVISFQLML
CVLDYFIKLSPPALLKEPYKTAVIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKE
HECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSKQYEEIYLKNKDLDARLFLDHD
KTLQADPTDSSEMQRTPQKSNPDEEVNVILPQTPVRTVMNTIQQLMMILNSSSDQPSENL
ISYFNNCTVNPKESILKRVKNIGHIFKEKFAKAVGQGCIEIGSQRYKLGVRLYYRVMESM
LKSEEERLSIQNFSKLLNDDIFHKSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNV
LNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAKDRE
GPADHLESPCSLNLPLQNNHTAADMYLSPVRSPKKKGSTTRVNSTANSEAQATSTFQTQK
PLRSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQYTLQNEYELMRDRHL
DQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSVF
MQRLKTNILQYASTRPPTLSPIPHIPRSPYKFSSSPLRIPGGNIYISPLKNPYKISEGLP
TPTKMTPRSRILVSIGESFGTSEKFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIE
GSDEADGSKHIPGESKFQQKLAEMTSTRTRMQKQKMNDSMDTSHREEK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatttggtagacttgagtttgaagaaactgaagaacctgattttactgcatta
tgtcagaaattaaaggtaccagatcatgtcagagaaagagcttggttaacttgggagaaa
gtttcatctgtggatggagtattggaaggttatattcaaaagaaaaaggaactatgggga
atctgtatctttattgcggcagttgacctagatgagatgccattcactttcactgagctg
cagaaaagcatagaaaccagtgtctataaattctttgacttactaaaagaaattgatacc
agtaccaaagttgataatgctatgtcaagactattgaagaagtataatgtactgtgtgca
ctctacagcaaattagaaaggacatgtgaacttatatacttggcacaacccagcagttcg
atatctactgaanataattctatgttggtgctaaaagtttcttggatcacatttttacta
gctaaaggggaagtattgcaagtggaagatgatctggtgatctcatttcagttaatgctc
tgtgtccttgactattttatcaaactctcacctcctgcattgctcaaagaaccatataaa
acagctgtaatacctattaatggttcacctcgaacaccaaggcgaggtcagaacaggagt
gcacggatagcaaaacaactagaaaatgatacaagaattattgaagttctctgtaaagaa
catgaatgtaatatagatgaggtgaaaaatgtttatttcaaaaattttatcccttttatg
aattctcttggaattgtagcttctaatggacttccagaggtggaaagtctctctaaacag
tatgaagaaatttaccttaaaaacaaagatctagatgcaagattatttctggatcatgat
aaaactcttcaggctgatcctacagacagttctgaaatgcagagaactccacaaaaaagt
aatcccgacgaagaggtgaatgtgattcttccacagactccagttaggactgttatgaat
accattcagcaattaatgatgatcttaaattcatcaagtgatcaaccatcagaaaacctg
atttcctactttaataattgcacagtgaatccaaaggaaagtatcctgaaaagagtgaag
aatattggacacatctttaaagagaaatttgctaaagctgtgggacagggatgtatagaa
attggatcacagcgatataaacttggagtccgattgtattaccgagtaatggaatccatg
cttaaatcagaagaagaacgattatccattcagaattttagcaaactgctgaatgacgac
atctttcataagtctttgttggcatgcgctcttgaggttgttatggctacatatagcaga
agtacgtctcagaatcttgatactggaacagatttgtcctttccatggattttgaatgta
ctcaatttaaaagcttttgatttttacaaagtgattgaaagttttatcaaagcagaagcc
aacttgaccagagaaatgattaaacatttagaacgatgtgaacatcgaatcatggaatct
cttgcatggctctcagattcacctttatttgaccttattaaacaagcaaaggaccgagag
ggaccagctgatcaccttgagtctccttgttctctcaaccttcctctgcagaacaatcac
actgcagcagacatgtatctttctcctgtaagatccccaaagaaaaaagggtcaactaca
cgtgtaaattctacggcaaattcagaggctcaagcaacctcaaccttccagactcagaag
ccattgagatctacctccctctcactcttttacaaaaaagtgtaccgactagcgtatctt
cgactaaataccctgtgtgcacgccttctgtctgaccacccagaactagaacacatcatc
tggacccttttccagtacacactgcaaaacgagtacgaactcatgagagacaggcatttg
gaccagattatgatgtgttccatgtatggcatatgcaaggtgaagaatatagaccttaag
ttcaaaatcattgtaacagcatacaaagatcttcctcatgctgttcaggagacattcaag
cgtgttttgatcagagaagaggagtatgattccattatcgtgttctataattcagtcttc
atgcagagactgaaaacaaacattttgcagtatgcttccaccaggccacctaccttgtca
ccaattcctcacattcctcgaagcccttacaagttttctagttcacctttaaggatccct
ggggggaacatctatatatcacccctaaagaatccatataaaatttcagaaggtctgcca
acgccaacaaaaatgactccaagatcaagaatcttagtatcaattggtgaatcatttggg
acttctgagaagttccagaaaataaatcaaatggtatgtaacagcgaccgtgtgctcaaa
agaagtgccgaaggaagcaaccctcctaaaccgctgaaaaaactgcgctttgacattgaa
ggatcagatgaagcagatggaagtaaacatatcccaggggagtccaagtttcaacagaaa
ctggcagaaatgacatctactcgaacacgaatgcaaaagcagaaaatgaatgatagcatg
gatacctcacacagggaagaaaagtga
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