Vicugna pacos (alpaca): 102545931
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Entry
102545931 CDS
T08098
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc00310
Lysine degradation
vpc01100
Metabolic pathways
vpc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102545931 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102545931 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102545931 (SETDB1)
Enzymes [BR:
vpc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
102545931 (SETDB1)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102545931 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102545931 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
102545931
NCBI-ProteinID:
XP_006217017
UniProt:
A0A6J3BCG7
LinkDB
All DBs
Position
21
AA seq
1299 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRKFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPLPPTPPAPPAPPAPPLSPQAGD
NESLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQAYRSPLGS
TPSTPAPPAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSE
QYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDF
LFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERI
PGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQVNPNSGYQYKRLEE
CLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIY
AGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGN
SGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGVSEMPSKDSRPPDL
GPPHIPVPPPIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEG
RAGGGRGEAEKASTSGLGFKDEGDVKQAKKEDPDDRNKMSVVTESSRNYGYNPSPVKTEG
LRRPPSKTSMHQSRRLMASAQSNADDILTLSSSTESEGESGTSRKPTAGQTSATAVDSDD
IQTISSGSEGDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAP
VRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFAS
KRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggatgcagcaaccgctgcagtggagtctgaa
gagattgcagaactgcaacaggcagtggttgaggagctgggtatctctatggaggaactt
cggaagttcatcgatgaagaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcagagttagagacatgggtgatacagaaggaatccgaggtggcccatgttgaccag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacagtaccgggacagtagctctgaggatgaagcttcccggcctaca
gaaataatagagattcctgatgaagatgatgatgtcctcagtattgattcaggggatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtcg
gctcaggatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cacaaaggaaccttgagtcagatgtctggagaactgagcaaagatggtgaccttatagtc
agcatgcgcattctgggcaagaagagaactaagacgtggcacaaaggcaccctcattgcc
atccagacggttgggccaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
ctactgtcagggaaccacattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgttacgcaatctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaggagtatatcactgcttac
cccaaccgccccatggtgttgctcaagagtggccagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgcgttgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgcggctctacacggctggagcccatgttcagc
atgaagacatcctcagcctctgcactggagaagaagcaagggggacagctcaggacacgt
ccgaacatgggtgctgtgaggagcaaaggtcctgtggtccagtatactcaggatctaacc
agtactggcacccagttcaagccagtagaacctccacagcctacagccccaccgttgcca
cctaccccacccgccccacctgccccacctgctccacctctgtccccccaggcaggtgac
aatgaaagcttggaaagccagcttgcccaatctcggaagcaggtagccaaaaagagcaca
tccttccggccaggatctgtgggctctggtcattcctcccctacatcccctgcactcagt
gaaaatgcccctggtgggaaacctgggatcaatcaggcgtatagatcacctttaggctca
acaccctctaccccagcacccccggctcccccagcacccccagcacccccagccttccat
ggcatgctggagcgggccccggcagagccttcctaccgcgcccccatggagaagcttttc
tacttacctcacgtctgcagctatacctgtctgtctcgagtcagacctatgagaagtgag
cagtaccgaggcaaaaaccctctcctagtcccactactgtatgacttccggcggatgaca
gcccggcgccgagtcaaccgcaagatgggctttcatgttatctataagacaccctgtgga
ctctgccttcggacaatgcaggagattgagcgctacctttttgagactggctgtgacttc
ctcttcctggagatgttctgtttggatccatatgttcttgtggaccgaaagtttcagccc
tataagcctttttactatattttggacatcacctatgggaaggaagatgttcccctatcc
tgtgtcaatgagattgacaccactcccccaccccaggtggcctacagcaaggaacgaatt
ccgggcaagggtgttttcattaacacaggccctgaatttctggttggatgtgactgcaaa
gatgggtgccgggacaagtccaagtgtgcctgccatcagctaactatccaggccacagcc
tgcaccccaggcggccaggtcaaccctaactctggctaccagtacaagagactagaagag
tgtctgcccacaggggtttatgaatgtaacaaacgctgcaaatgtgatccaaacatgtgc
acaaaccggttggtgcagcatggactgcaggttcggctgcagctcttcaagacccagaac
aagggctggggtatccgctgcttggatgacattgcgaaaggctcctttgtctgtatttat
gcaggcaaaatcctgacagatgactttgcagacaaggagggcctggaaatgggtgatgag
tactttgccaatctggaccacatcgagagcgtggagaacttcaaggaaggatatgagagc
gatgccccctgttcctctgacagcagtggtgtagacttgaaggaccaggaagatggcaac
agcggtacagaggaccccgaagagtccaatgacgatagctcagatgataacttctgtaaa
gatgaggacttcagcaccagctcggtgtggcgcagctatgctacccggaggcaaacccgg
ggccagaaggagaatggagtgtctgagatgccttccaaggactcccgcccccccgacctt
gggcccccacatattcctgtccctccaccaatccctgtaggtggctgcaatccaccttcc
tctgaagagacacccaagaacaaggtggcctcgtggttgagctgcaatagtgtcagtgaa
ggtggctttgctgactctgacagccgttcatccttcaagactagtgaagggggggaaggc
cgggctgggggaggcagaggggaggctgagaaagcctccacctcagggctgggcttcaag
gatgagggcgacgtcaagcaggccaagaaagaggaccctgatgaccgaaacaagatgtca
gtagttactgaaagctctcgaaattatgggtacaatccttctcccgtgaagactgaagga
cttcgccgcccaccaagtaagactagtatgcatcagagccgacgactcatggcctctgct
cagtccaatgctgatgatatcctgacgctgtccagcagcacagaaagcgagggggaaagt
gggaccagccgaaagcccactgctgggcagacttcagccacagccgttgacagtgatgat
atccagaccatctcctctggctctgaaggggatgactttgaggacaagaaaaacatgtct
ggtccaatgaagcgccaagtggcagtaaaatcaacccggggttttgctcttaaatcaacc
catgggattgccattaagtcaaccaacatggcgtccgtggaaaagggggagagtgctcct
gttcgtaagaacacacgccagttctacgatggtgaggagtcttgctacatcattgacgcc
aagcttgaaggcaacctgggccgctacctcaatcacagttgcagccccaacctgtttgtc
cagaatgtcttcgtggatactcatgatcttcgcttcccctgggtggccttttttgccagc
aagagaatccgggctgggacagaactcacctgggactacaactacgaggtgggcagcgtg
gaaggcaaggagctgctgtgctgctgtggggccatcgaatgcagagggcgtcttctttag
DBGET
integrated database retrieval system
