KEGG   Vicugna pacos (alpaca): 102546125
Entry
102546125         CDS       T08098                                 
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
  KO
K05948  fringe [EC:2.4.1.222]
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc00514  Other types of O-glycan biosynthesis
vpc04330  Notch signaling pathway
vpc05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00514 Other types of O-glycan biosynthesis
    102546125 (RFNG)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    102546125 (RFNG)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102546125 (RFNG)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:vpc01003]
    102546125 (RFNG)
Enzymes [BR:vpc01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.222  O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
     102546125 (RFNG)
Glycosyltransferases [BR:vpc01003]
 Glycan extension
  O-Glycan
   102546125 (RFNG)
SSDB
Motif
Pfam: Fringe
Other DBs
NCBI-GeneID: 102546125
NCBI-ProteinID: XP_006199656
LinkDB
Position
Unknown
AA seq 205 aa
MSVEYDKFIESRRKWFCHVDDDNYVNSEGLLQLLATFSPSQDVYLGRPSLDHPIEATERV
QEGGTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCTVGYIVEG
LLGARLLHSSLFHSHLENLQRLPPDSVLQQVTLSYGGPENPQNVVNVAGGFSREQDPTRF
KSIHCLLYPDTDWCPARKQDDLASR
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtcggtggagtatgacaagttcatcgagtccagacgcaagtggttctgccacgtggac
gatgacaactacgtgaactcagaaggcctgctgcagctgctggccaccttctcacctagc
caggacgtctacctggggcggcccagcctggaccaccccatcgaggctaccgagcgggtc
caggaaggtggcaccgtgaccaccgtcaagttctggttcgctacaggcggggccgggttc
tgcctgagccggggcctggccctcaagatgagcccctgggccagcctgggcagcttcatg
agcaccgccgagcgcgtgcggctgccggacgactgcacggtgggctacatcgtggagggg
ctgctgggtgcccgcctgctgcacagctcccttttccactcccacctggagaacctgcag
aggctgccgcccgactccgtgctccagcaggtcaccctgagctatgggggccctgagaac
cctcagaacgtggtgaacgtggccggaggcttcagccgggagcaggaccccacaaggttt
aagtccatccactgccttctctacccggacacggactggtgtcctgcgcggaagcaggat
gaccttgcttctcggtga

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