Variovorax paradoxus B4: VAPA_1c13350
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Entry
VAPA_1c13350 CDS
T02835
Symbol
ileS
Name
(GenBank) isoleucine--tRNA ligase IleS
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VAPA_1c13350 (ileS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpd01007
]
VAPA_1c13350 (ileS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c13350 (ileS)
Enzymes [BR:
vpd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
VAPA_1c13350 (ileS)
Amino acid related enzymes [BR:
vpd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VAPA_1c13350 (ileS)
Transfer RNA biogenesis [BR:
vpd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VAPA_1c13350 (ileS)
Prokaryotic type
Other AARSs
VAPA_1c13350 (ileS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
AGU48450
UniProt:
T1X8F9
LinkDB
All DBs
Position
1:complement(1455742..1458591)
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AA seq
949 aa
AA seq
DB search
MSDAASPTDYRSTLNLPDTPFPMRGDLPKREPGWVKEWNDEGRYHRLRDARHGAPKFILH
DGPPYANGQIHMGHAVNKILKDMITKARQLEGYDALYVPGWDCHGLPIENAIEKQYGRNL
SRDEMQAKSRAYATEQIAQQMADFQRLGVLGEWDHPYKTMDFANEAGELRAFKRVIERGF
VYRGLKPVYWCFDCGSSLAEFEIEYADKKSQTVDVAFKAHEREKVLTAFETDHTILGDIF
AVIWTTTAWTIPANQAINLNPELEYSLVDTERGLLILANSLVEMCMTRYALDGKVLATVK
GEKLGGLEFEHPLYDVDAGYQRLSPVYLADYATATDGTGLVHSSPAYGVDDFNSCIAHGV
AYDDILNPVQGNGSYAPDFPLFGGQNIWKAVPVIIAALRDANRLLTTETITHSYPHCWRH
KTPVIYRAAAQWFIRMDEGEGVFTKDKAPKTLRQTALDAIEQTSFYPENGKARLHDMIAG
RPDWCISRQRSWGVPIPFFLHKDSGELHPRTMEILDQAADIVEQGGIEAWSRVTVEEILG
AEDAPHYAKSTDILEVWFDSGSTFYHVLRGTHPNVHHETGPEADLYLEGHDQHRGWFHSS
LLIACALEDRAPYRGLLTHGFTVDAKGIKMSKSLKNGIDPQEISNKLGSEIIRLWVAASD
YSGDIAGDDKILARVVDAYRRIRNTLRFLLANTSDFDIAKDAVPLEELFEIDRYALSRAA
QFQAEILAHYKVYEFHPVVAKLQIYCSEDLGGFYLDILKDRLYTTAPGSLARRSAQTALW
HISQAMLRWMAPFLSFTAEEAWKFVSTGKPGESIFAQTYSQFAAPDEALLAKWGRIREIR
DVVNKDIEAVRAEGKVGSSLQATLQLSAPADDFALLGTLGDDLKFVFITSAIELAAGEAL
SSVVTPSSAQKCERCWHYRDDVGHDPAHPTICGRCTSNLFGAGESRSFA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccgcttcccccaccgactaccgttccacgctgaacctgcccgacaccccc
ttcccgatgcgcggcgacctgcccaagcgcgaaccgggctgggtgaaggaatggaacgac
gaaggccgctatcaccgcctgcgcgacgcccgccacggcgcgcccaagttcatcctgcac
gacggcccgccgtacgccaacggccagatccacatgggccacgcggtgaacaagatcctg
aaggacatgatcaccaaggcgcgccagctcgaaggctacgacgcgctctacgtgccgggc
tgggactgccatggcctgccgatcgagaacgccatcgaaaagcagtacggccgcaacctg
agccgcgacgaaatgcaggccaagagccgcgcctacgccacggaacagatcgcgcagcag
atggccgacttccagcgcctgggcgtgctgggcgaatgggaccatccctacaagacgatg
gatttcgcgaatgaagccggcgagctgcgcgccttcaagcgcgtgatcgagcgcggcttc
gtctaccgcggcctgaagcccgtgtactggtgcttcgactgcggctcgtcgctggccgag
ttcgagatcgaatacgccgacaagaagagccagaccgtcgacgtggccttcaaggcgcac
gagcgcgagaaggtgctcacggccttcgagaccgaccacacgatcctcggcgacatcttt
gccgtgatctggaccaccaccgcgtggaccatccccgccaaccaggcgatcaacctcaac
cctgagctcgaatactcgctggtcgataccgagcgcggcctgctgatcctggccaactcg
ctggtcgagatgtgcatgacgcgctatgcgctcgacggcaaggtgctggccacggtcaag
ggcgagaagctcggcgggctcgagttcgagcatccgctctatgacgtcgacgccggctac
cagcgcctgtcgcccgtgtacctggccgactacgccaccgccaccgacggcaccggcctc
gtgcactcctcgcccgcctacggcgtggacgacttcaactcctgcatcgcccacggcgtg
gcctacgacgacatcctgaacccggtgcagggcaacggcagctacgcgcccgacttcccg
ctcttcggcgggcagaacatctggaaggccgtgccggtcatcatcgccgcgctgcgtgac
gccaaccgcctgctgaccaccgagaccatcacgcacagctatccgcactgctggcgccac
aagacgccggtgatctaccgcgccgcggcgcagtggttcatccgcatggacgagggcgaa
ggcgtgttcaccaaggacaaggcgcccaagacgctgcgccagaccgcgctcgacgccatc
gaacagaccagcttctatcccgagaacggcaaggcgcgcctgcacgacatgatcgccggg
cggcccgactggtgcatcagccgccagcgcagctggggcgtgccgatcccgttcttcctg
cacaaggattcgggcgaactgcatccgcgcacgatggaaatcctcgaccaggccgccgac
atcgtcgagcagggcggcatcgaggcctggagccgagtcaccgtcgaagagatcctgggc
gccgaagacgcaccgcactacgccaagagcaccgacatcctcgaggtgtggttcgactcg
ggctcgaccttctatcacgtgctgcgcggcacgcatcccaacgtgcaccacgagaccggc
cccgaagccgacctgtacctcgaaggccacgaccagcatcgcggctggttccattcgtcg
ctcctgatcgcctgcgcactggaagaccgcgcaccgtaccgcggcctgctcacgcacggc
ttcacggtggatgccaagggcatcaagatgagcaagtcgctcaagaacggcatcgacccg
caggagatcagcaacaagctgggctcggaaatcatccggctgtgggtggccgcgagcgac
tactcgggcgacatcgcaggcgacgacaagatcctcgcgcgcgtggtcgatgcctaccgc
cgcatccgcaacacgctgcgcttcctgctggcgaacaccagcgacttcgacatcgccaag
gatgcggtgccgctcgaagagctgttcgagatcgaccgctatgcgctgtcgcgcgcggcg
cagttccaggccgagatcctcgcgcactacaaggtgtacgagttccatccggtggtggcc
aagctgcagatctactgctcggaagacctgggcggcttctacctcgacatcctcaaggac
cggctctacacgacagcgccgggctcgctggcgcgccgcagcgcgcagacggcgctctgg
cacatctcgcaggcgatgctgcgctggatggcgccgttcctgagcttcacggccgaagag
gcgtggaagttcgtgagcacgggcaagccgggcgagtcgatcttcgcgcagacctacagc
cagttcgccgcgcccgatgaggccttgctcgccaaatggggccgcatccgcgagatccgc
gacgtggtcaacaaggacatcgaagccgtgcgcgccgaaggcaaggtcggctcgtcgctg
caggccaccctgcagctcagcgcaccggccgacgacttcgcgctgctgggcacgctgggc
gacgacctgaagttcgtcttcatcacctccgccatcgaattggcggcgggcgaggcgctg
tcttcagtagtgacgccgagcagcgcgcagaagtgcgagcgctgctggcactaccgcgac
gacgtgggccacgacccggcgcatccgacgatctgcggccgttgcaccagcaacctgttc
ggcgccggcgagtcgcggagctttgcctga
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