Variovorax paradoxus B4: VAPA_1c23400
Help
Entry
VAPA_1c23400 CDS
T02835
Symbol
pdhA
Name
(GenBank) pyruvate dehydrogenase E1 component PdhA
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00010
Glycolysis / Gluconeogenesis
vpd00020
Citrate cycle (TCA cycle)
vpd00620
Pyruvate metabolism
vpd00785
Lipoic acid metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
Module
vpd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VAPA_1c23400 (pdhA)
00020 Citrate cycle (TCA cycle)
VAPA_1c23400 (pdhA)
00620 Pyruvate metabolism
VAPA_1c23400 (pdhA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VAPA_1c23400 (pdhA)
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
VAPA_1c23400 (pdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
AGU49442
UniProt:
T1X930
LinkDB
All DBs
Position
1:2494725..2497439
Genome browser
AA seq
904 aa
AA seq
DB search
MSANPENLFGSAANDADAQETREWMDALSSVIQSEGPERAHFLLEQLLEHARQHSIDKPF
SANTAYVNTIEPDQEERCPGNLEIEERLRAYMRWNAMAMVVKANRHHPAEGGDLGGHIGS
FASLANMFGAGFNHFWHAESENHGGDCLYIQGHVSPGIYARAYLEGRLSEEQLLNFRQEV
DGNGLSSYPHPKLMPEFWQFPTVSMGLGPLMAIYQARFLKYLHARGIANTENRKVWVFCG
DGEMDEVESLGAIGLAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQELEGEFRGSGWNV
IKLIWGSSWDPLLARDKDGALRKIMMETNDGDYQAFKANDGAYVRKHFFGRDPRTLEMVS
KMSDDDIWQLRRGGHDSQKVYAAFDAAVKHKGQPTVLLIKTVKGFGMGKIGEGKNTVHQT
KKLGDEDIKAFRDRFNIPIPDSQISDLPFYRPADDTPEMKYLHERRKALGGYLPHRRTKA
DESFTVPSLDVFKSVMEPTAEGREISTTQAYVRFLTQLLRDKALGPRVVPILVDEARTFG
MEGLFRQIGIYNPAGQQYTPVDKDQVMYYKEDKAGQILQEGINEAGGMSSWIAAATSYST
NNRIMVPFYVYYSMFGFQRIGDLAWAAGDMQARGFLLGGTSGRTTLNGEGLQHEDGHSHI
LANTIPNCVSYDPTFAHEVGVILHHGLKRMVERQDNVYYYLTLLNENYPMPGLQPGTEEQ
IIKGMYLSKQGPALKAKSPTVQLLGSGTILRESFAAQELLEKDWGVSASVWSCPSFNELT
RDGQDADRWNLLHPDQAPRVPFVAEQLAPTAGPVVASTDYMKAYAEQIRPFIPKGRTYKV
LGTDGFGRSDFRNKLREHFEINRHYIVVAALKALSEDGTVPVAKVVEAIKKYGINVDKVN
PLYA
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaatcccgagaacctgttcggttcggccgcgaacgacgcggacgcccaggaa
acccgtgaatggatggatgcactgtcctccgtgattcaaagcgagggacctgaacgggcc
cacttccttctcgagcagctgctcgaacatgcgcggcaacacagcatcgacaagccgttc
tccgccaatacggcctacgtcaacaccatcgagcccgaccaggaagagcgctgccccggc
aacctcgagatcgaggagcgcctgcgcgcctacatgcgctggaacgccatggcgatggtg
gtcaaggccaaccgccaccaccccgccgaaggcggcgacctgggcggccacatcggctcc
ttcgcctcgctggccaacatgttcggtgccggtttcaaccacttctggcacgccgagagc
gaaaaccacggcggcgactgcctctacatccagggccacgtctcgcccggcatctatgcc
cgcgcctacctcgaaggccgcctgagcgaagaacaacttctcaatttccgccaggaagtc
gacggcaacggcctgtccagctacccgcatccgaagctgatgcccgagttctggcaattc
ccgaccgtctcgatgggcctcggcccgctgatggccatctaccaggcccgcttcctcaag
tacctgcatgcccgtggcatcgccaacaccgagaaccgcaaggtctgggtgttctgcggc
gacggcgaaatggacgaggtcgaatcgctgggcgccatcggcctcgccgcgcgcgaaggc
ctcgacaacctgatcttcgtcatcaactgcaacctgcagcgcctggacgggccggtgcgc
ggcaacggcaagatcatccaggagctcgaaggcgagttccgcggttcgggctggaacgtc
atcaagctgatctggggcagcagctgggacccgctgctggcgcgcgacaaggacggagcg
ctgcgcaagatcatgatggagaccaacgacggcgactaccaggccttcaaggccaacgac
ggcgcctacgtgcgcaagcatttcttcggccgtgacccgcgcacgctcgaaatggtgtcc
aagatgagcgacgacgacatctggcaactgcgccgcggtggccacgattcgcaaaaggtc
tacgcggccttcgacgcggccgtgaagcacaagggccagccgacggtgctcctgatcaag
acggtcaagggcttcggcatgggcaagatcggcgagggcaagaacacggtccaccagacc
aagaagctcggcgacgaggacatcaaggccttccgcgaccgcttcaacatcccgatcccg
gacagccagatctccgacctgccgttctacaggccggccgacgacacgccggaaatgaag
tacctgcacgagcgccgcaaggccctcggcggctacctgccgcaccgccgcaccaaggcc
gacgagagcttcacggtgccttcgctcgacgtcttcaagtcggtgatggagcccacggcc
gaaggccgcgagatctcgaccacgcaggcctacgtgcgcttcctcacgcagctgctgcgc
gacaaggccctgggcccgcgcgtcgttcccatcctcgtggacgaagcacggaccttcggc
atggaagggttgttccgccagatcggcatctacaaccccgcaggccagcagtacaccccg
gtcgacaaggaccaggtcatgtactacaaggaagacaaggccggccagatcctgcaggaa
ggcatcaacgaagcgggcggcatgtcgagctggatcgcggcggccacgtcgtacagcacg
aacaatcgcatcatggtgccgttctacgtgtactactcgatgttcggcttccagcgcatc
ggcgacctggcctgggcggccggcgacatgcaggcgcgcggcttcctgctgggcggcacc
tcggggcgcaccacgctcaacggcgaaggcctgcagcacgaagacggccacagccacatc
ctggccaacaccatcccgaactgcgtgagctacgacccgaccttcgcgcatgaagtgggc
gtgatcctgcaccacggcttgaagcgcatggtcgagcgccaggacaacgtctactactac
ctcacgctgctcaacgagaactacccgatgcccggcctgcagcccggcaccgaagagcag
atcatcaagggcatgtacctgtcgaagcagggcccggcgctgaaggccaagtcgcccacc
gtgcaactgctgggcagcggcacgatcctgcgcgaaagcttcgctgcgcaagagctgctc
gaaaaggactggggcgtctccgcctcggtgtggagctgcccgagcttcaacgagctgacg
cgcgacggccaggacgccgaccgctggaacctgttgcacccggaccaggcgccacgcgtg
cccttcgtggccgagcagctcgcacccacggccggtccggtggtggcatcgaccgactac
atgaaggcgtatgcggaacagatccgccccttcatcccgaagggccgcacctacaaggtg
ctgggcacagacggcttcggccgcagcgacttccgcaacaagctgcgcgagcacttcgaa
atcaaccgccactacatcgtggtggctgcgctcaaggcgctgagcgaagacggcacggtg
cctgtggccaaggtggtcgaggcgatcaagaagtacggcatcaatgtcgacaaggtcaac
ccgctttacgcttga
DBGET
integrated database retrieval system
