Variovorax paradoxus B4: VAPA_1c23510
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Entry
VAPA_1c23510 CDS
T02835
Symbol
odhA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component OdhA
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00020
Citrate cycle (TCA cycle)
vpd00785
Lipoic acid metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VAPA_1c23510 (odhA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VAPA_1c23510 (odhA)
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
VAPA_1c23510 (odhA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AGU49453
UniProt:
T1XA75
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All DBs
Position
1:2509667..2512543
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AA seq
958 aa
AA seq
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MSDSSKPTAYAAYQGNTYLFGGNAPYVEEMYENYLSNPGSVPDNWRSYFDALQNVPAVDG
SNTRDVPHQPVINAFAERAKQGTTKVVQASGADSELGRKRTAVQQLIAAYRNVGARWADL
DPLKRAERPAIPELEPSFYGFTDADLETVFNTSNTFFGREAMSLRDLLNALRETYCGTMG
AEYMYTTDQNHKRWWQQKLESARTNPQLNADQKKHVLNRLTAAEGLERFLHTKYVGQKRF
SLEGGESFIVSMDELINQAGIKGVQEIVIGMAHRGRLNVLVNSLGKMPADLFAEFDHTAP
EDLPSGDVKYHQGFSSDVTTPGGPVHLSLAFNPSHLEIVNPVVEGSVRARMDRRADPQGK
QVLPVLVHGDAAFAGQGVVMETLALAETRGYFTGGTVHIVINNQIGFTTSDPRDSRSTLY
CSDIVKMIEAPVLHVNGDDPEAVVLATQLALEFRMEFQKDVVVDIICFRKLGHNEQDTPS
LTQPLMYKKIAQHPGTRKLYADKLATQGLGDTLGDDMVKAQRAAFDEGRNTVDPVLTNFK
SKYAVDWNPYLNKKWTDAGDTAIPSSEWKRLAEKITTVPAGFTVHPLVKKVLDDRAAMGR
GDVNVDWGMGEHMAFASLVASGYPVRLSGEDSGRGTFTHRHAVLHDQNREKFDEGTYTPL
QNVAENQAPFVVIDSILSEEAVLAFEYGYASNDPNTLVIWEAQFGDFVNGAQVVIDQFIA
SGEVKWGRVNGLTMMLPHGYEGQGPEHSSARLERFMQLSADTNMQVVQPTTASQIFHVLR
RQMVRNLRKPLIIMTPKSLLRNKDATSPLSEFTKGGFQTVIPDSKGLKAEKVKRLIACSG
KVYYDLAKKREEKGDDDVAIIRVEQLYPFPHKAFATELKKYPNLADVVWCQDEPQNQGAW
FFVQHYIHENMQDGQKLGYSGRAASASPAVGYSHLHQEQQKALVDGAFGKLKGFVLTK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcctccaagcccacggcgtatgccgcgtatcagggcaacacgtacctcttc
ggcggcaatgcgccctatgtcgaagagatgtacgaaaactacctctccaatcccggaagc
gtgcctgacaactggcgttcgtacttcgacgccctgcagaacgtgcccgcggtcgatggc
tccaacacccgggacgtcccgcaccagccggtgatcaacgcctttgccgaacgcgcgaag
cagggcaccaccaaggtcgtgcaggccagcggcgcggattccgagctcggccgcaagcgc
accgccgtccagcagctgattgccgcctaccgcaacgtcggcgcccgctgggccgacctg
gaccccctcaagcgcgccgagcgcccggccattccggaactcgagccctcgttctacggc
ttcaccgacgccgacctcgagacggtgttcaacaccagcaacaccttcttcggcagggag
gccatgtcgctgcgcgacctgctcaatgccttgcgcgaaacgtactgcggcacgatgggt
gccgagtacatgtacaccaccgaccagaaccacaagcgctggtggcagcagaagctcgaa
agcgcccgcaccaacccgcagctcaacgcggaccagaagaagcacgtgctgaaccgcctg
accgcggccgaaggcctcgaacgcttcctgcacaccaagtacgtcggccagaagcgcttc
tcgctcgaaggcggcgagagcttcatcgtctcgatggacgagctgatcaaccaggccggc
atcaagggcgtgcaggaaatcgtgatcggcatggcccaccgcggccgcctcaacgtgctg
gtcaactcgctcggcaagatgccggccgacctgttcgccgagttcgaccacaccgcaccc
gaagacctgcccagcggcgacgtcaagtaccaccagggcttcagctcggacgtgaccacg
cccggcggcccggtgcacctgagcctggcgttcaatccctcgcacctcgagatcgtgaac
cccgtggtcgaaggctcggtgcgcgcccgcatggaccgccgcgccgacccgcagggcaag
caggtgctgcccgtgctggtgcacggcgacgccgccttcgcgggccagggcgtcgtgatg
gaaacgctggcactggccgaaacccgtggctacttcacgggcggcacggtgcacatcgtc
atcaacaaccagatcggcttcaccaccagcgacccgcgcgacagccgctcgacgctgtac
tgctcggacatcgtcaagatgatcgaggcgccggtgctgcacgtgaacggcgacgatccc
gaggccgtggtgctcgccacccagctcgcccttgaattccgcatggagttccagaaggac
gtggtggtcgacatcatctgcttccgcaagctcggccacaacgagcaggacactccctcg
ctcacgcagccgctcatgtacaagaagatcgcccagcaccccggcacgcgcaagctgtac
gccgacaagctggcgacgcagggcctgggcgacacgctcggcgacgacatggtcaaggcc
cagcgcgccgccttcgacgaaggccgcaacacggtcgacccggtgctcacgaacttcaag
agcaagtacgccgtcgactggaatccgtacctcaacaagaagtggaccgacgccggcgac
accgccattccgtccagcgagtggaagcgcctggccgagaagatcaccacggtgccggcc
ggcttcacggtgcacccgctcgtgaagaaggtgctggacgaccgtgccgccatgggccgc
ggcgacgtgaacgtcgactggggcatgggcgagcacatggcctttgcctcgctggtggcc
agcggctacccggtgcgcctgtcgggcgaagacagcggccgcggcacgttcacgcaccgc
cacgccgtgctgcacgaccagaaccgcgagaagttcgacgaaggcacctacacgccgctg
cagaacgtggccgagaaccaggcaccgttcgtcgtgatcgactcgatcctgtcggaagag
gccgtgctcgcgttcgaatacggctacgcctcgaacgacccgaacacgctggtgatctgg
gaagcccagttcggcgacttcgtgaacggcgcgcaagtggtgatcgaccagttcatcgcc
tcgggcgaagtgaagtggggccgcgtcaacggcctgaccatgatgctgccgcacggctac
gaaggccagggccccgagcacagctcggcgcgcctggagcgcttcatgcagctgagcgcc
gacaccaacatgcaggtggtgcagcccaccacggccagccagatcttccacgtgctgcgc
cgccagatggtgcgcaacctgcgcaagccgctgatcatcatgacgccgaagtcgctgctg
cgtaacaaggacgcgacctcgccgctgtccgagttcaccaagggtggcttccagacggtc
attccggacagcaagggcctgaaggccgagaaggtcaagcgcctgatcgcctgctcgggc
aaggtctactacgacctggccaagaagcgcgaagaaaagggcgacgacgacgtggcaatc
atccgcgtcgagcagctctatccgttcccgcacaaggctttcgccaccgagctcaagaag
tacccgaacctcgccgatgtggtgtggtgccaggacgagccgcagaaccagggcgcctgg
ttcttcgtgcagcactacatccacgagaacatgcaggacggccagaagctcggctactcc
ggccgtgccgcttcggcatcgcccgcagtcggctactcgcacctgcaccaggaacagcag
aaggcgctcgtcgatggcgcatttggcaagctcaagggcttcgtgctgaccaagtaa
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