Variovorax paradoxus B4: VAPA_1c23520
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Entry
VAPA_1c23520 CDS
T02835
Symbol
odhB
Name
(GenBank) dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OdhB
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00020
Citrate cycle (TCA cycle)
vpd00310
Lysine degradation
vpd00380
Tryptophan metabolism
vpd00785
Lipoic acid metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VAPA_1c23520 (odhB)
09105 Amino acid metabolism
00310 Lysine degradation
VAPA_1c23520 (odhB)
00380 Tryptophan metabolism
VAPA_1c23520 (odhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VAPA_1c23520 (odhB)
Enzymes [BR:
vpd01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
VAPA_1c23520 (odhB)
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AGU49454
UniProt:
T1XAU4
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All DBs
Position
1:2512597..2513844
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AA seq
415 aa
AA seq
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MSIVEVKVPQLSESVAEATMLTWKKKAGEAVAVDEILIEIETDKVVLEVPAPSAGVLAEI
VQPDGATVVADQLIAKIDTEGKASAAAPATAPAAAPAPAAAAAAATGGAKSDVAMPAAAK
LLADNNLKTSDVAGTGKDGRVTKGDVLGAVASGAKPAAAVAAPAAKPALPQVAAPASAPD
LGERPEQRVPMSRLRARIAERLLQSQSTNAILTTFNEVNMAPVMELRKRFQDSFTKEHGV
KLGFMSFFVKAAVHALKKYPVINASVDGNDILYHGYFDIGIAVGSPRGLVVPILRNADQM
SFADIEKKIAEYGKKAQDGKLGIEEMTGGTFSISNGGTFGSMLSTPIINPPQSAILGVHA
TKDRAVVENGQIVIRPMNYLAMSYDHRIIDGREAVLGLVAMKEALEDPSRLLFDI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgtagaagtcaaagtcccccagctttccgaatccgtggccgaagccaccatg
ctcacctggaagaagaaagccggcgaagccgtcgccgtcgatgaaatcctgatcgagatc
gagaccgacaaggtcgtgctcgaagtgcccgcgccctcggctggcgtgctggccgaaatc
gtgcagcccgatggcgccaccgtggtggccgaccagctgatcgcgaagatcgacaccgaa
ggcaaggcaagtgccgcagcgcctgcaacagcacccgctgccgcgccggccccggcagca
gcggctgccgccgccaccggcggcgcgaagtcggacgtcgccatgcccgccgccgccaag
ctgctggccgacaacaacctgaagaccagcgacgtcgccggcaccggcaaggacggccgc
gtcaccaagggcgacgtgctcggcgcagtcgcttcgggcgccaagcccgcggccgccgtg
gccgcaccggccgccaagcccgctctgccacaggtcgccgcacccgccagcgcgcctgat
ctgggcgaacgccccgagcagcgcgtgccgatgagccgcctgcgcgcccgcatcgccgag
cgcctgctgcagtcgcaatcgaccaacgccatcctgacgaccttcaatgaagtcaacatg
gcgcccgtcatggaactgcgcaagcgcttccaggacagcttcaccaaggaacacggcgtg
aagctcggcttcatgagcttcttcgtgaaggccgcggtgcatgcgctcaagaagtacccg
gtgatcaacgcctcggtcgacggcaacgacatcctgtaccacggctacttcgacatcggc
attgccgtcggttcgccgcgcggcctggtggtgcccattctgcgcaacgccgaccagatg
agctttgccgacatcgagaagaagatcgccgaatacggcaagaaggcgcaggacggcaag
ctcggcatcgaagagatgaccggcggcaccttctccatctcgaacggcggcaccttcggc
tcgatgctctcgaccccgatcatcaacccgccgcagtcggccatcctgggcgtgcacgcc
accaaggaccgcgccgtggtcgagaacggccagatcgtcatccgcccgatgaactacctc
gccatgagctacgaccaccgcatcatcgacggccgcgaagccgtgctgggcctggtcgcc
atgaaggaagcgctggaagatccgtcgcgcctgctgttcgacatctga
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