Variovorax paradoxus B4: VAPA_1c29770
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Entry
VAPA_1c29770 CDS
T02835
Symbol
serB
Name
(GenBank) putative phosphoserine phosphatase SerB
KO
K01079
phosphoserine phosphatase [EC:
3.1.3.3
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00260
Glycine, serine and threonine metabolism
vpd00680
Methane metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
VAPA_1c29770 (serB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VAPA_1c29770 (serB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vpd01009
]
VAPA_1c29770 (serB)
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.3 phosphoserine phosphatase
VAPA_1c29770 (serB)
Protein phosphatases and associated proteins [BR:
vpd01009
]
HAD phosphatases
Other HAD phosphatases
VAPA_1c29770 (serB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hydrolase
HAD
Hydrolase_3
Put_Phosphatase
HAD_2
DUF5609
Motif
Other DBs
NCBI-ProteinID:
AGU50070
UniProt:
T1XD69
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All DBs
Position
1:3142021..3142731
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AA seq
236 aa
AA seq
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MSATEISPGLVIQRMKPPLVLADFKLIAFDMDSTLINIECIDEIADAVGKKAEVAAITEA
TMRGEIKDFKESLRRRVALLQGVPVEALQQVYDQRLKLNPGAAELVAACKVAGLKVLLVS
GGFTFFANRVKDRLGIDFARSNLLDEADGKLTGQVVTQSWGDICDGAEKRRTLLEVASLL
GISPQEAIAVGDGANDLPMMGEAGLSVAYHAKPKVREQAMVAINEGGLDRLLEVLK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctacagaaatttctcccggcctcgtcatccagcgcatgaagccgccgctggtg
ctggccgacttcaagctgatcgcgttcgatatggactcgacgctgatcaacatcgaatgc
atcgacgagatcgccgatgccgtcggcaagaaggccgaggtggctgcgatcaccgaagcc
acgatgcgcggcgagatcaaggacttcaaggaaagcctgcgacggcgcgtggcgctgctg
cagggcgtgccggtcgaggcgctgcagcaggtctacgaccagcggctgaagctcaatccg
ggcgcggcggaactggtggcggcctgcaaggtggccggcctcaaggtgctgctggtgtcg
ggtggcttcaccttcttcgcgaaccgcgtgaaggaccggctgggcatcgacttcgcgcgc
tccaacctgctcgacgaggccgacggcaagctcaccggccaggtggtgacgcagagctgg
ggcgacatctgcgacggcgccgagaagcgccgcacgctgctcgaggtcgcatccctcctg
ggcatctctccgcaggaagccattgccgtgggcgacggcgcgaacgacctgccgatgatg
ggcgaagccggcctttcggtggcctaccacgcgaagccgaaggtccgcgagcaggccatg
gtggcgatcaatgaaggtggcctcgaccgcctgctggaagtcctgaaatga
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