Variovorax paradoxus B4: VAPA_1c29890
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Entry
VAPA_1c29890 CDS
T02835
Name
(GenBank) putative RND efflux system outer membrane lipoprotein, NodT family
KO
K18903
outer membrane protein, multidrug efflux system
Organism
vpd
Variovorax paradoxus B4
Module
vpd_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c29890
01504 Antimicrobial resistance genes [BR:
vpd01504
]
VAPA_1c29890
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c29890
Antimicrobial resistance genes [BR:
vpd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
VAPA_1c29890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AGU50082
UniProt:
T1XB03
LinkDB
All DBs
Position
1:complement(3152566..3154050)
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AA seq
494 aa
AA seq
DB search
MKFAFQPWVRNALLPLVAGLALAGCATVPSGLPEIQTTAQFKEQGAAPPAGWTRAVPSEA
QARGAWWLAFNDPVLNALVEKADVNNNNIQAAAARLAEARALARSANADRMPQIGLGAGA
NRGAGLDKATASTRPATMTNIGATFSYEVDLFGRLSGASNAAKLDAQSREALLQSTRLAV
QAEVAQTYLQLRALDAERALVREQVEAYRDTLRLSQRRQQAGDIAELDVARVQTEVSSTE
SDALALDRQRAQVEHALAVLVGDSASSFGLRTDDWATALPSVPPGVPATVLTRRPDVSAA
QNAVLSAQARVGVAQAAWFPDISLTGAAGYASPEIGDLFKWSARSWGVGALLSLPIFDGG
RREAGVQGANAQLDGALANYRNQVLVAFQEVEDQLAAIRILQEQSVVQAQAVTSAQRATS
LSDTRYRNGYISQLDLLDARRSELRNRRQALQVKSAQYQAAVGLIRAIGGGWEAPAATAQ
VQPGGTAAVKTAAR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgcatttcaaccttgggtccgcaacgctttgttgccgctggtggcgggcctg
gcgctggccggctgcgcgaccgtgccctccggcctgccggagatccagaccaccgcccag
ttcaaggagcagggcgccgccccgcctgcgggctggacgcgggccgtgccctccgaagcg
caggcgcgcggcgcctggtggctggcgttcaacgacccggtgctcaatgcgctggtcgag
aaggccgacgtcaacaacaacaacatccaggccgcggcggcgcggctggccgaggcccgc
gcgctggcgcgcagcgccaacgccgaccgcatgccgcagatcggcctgggcgcgggcgcc
aaccgtggcgcgggcctcgacaaggccacggccagcaccaggccggccaccatgaccaac
atcggcgccacgttctcgtacgaggtcgacctgttcggccgcctctcgggcgcaagcaat
gcggccaagctcgacgcgcagagccgcgaggccctgctgcaaagcacgcgcctcgcggtg
caggccgaggtggcccagacctacctgcaactgcgcgcgctcgacgccgagcgcgcgctg
gtgcgcgaacaggtcgaggcctaccgcgacacgctgcggctctcgcagcgccgccagcag
gccggcgacatcgccgagctcgacgtggcgcgcgtgcagaccgaggtctcgtccaccgag
tcggatgcgcttgcgctcgaccggcagcgcgcccaagtcgagcatgcgctcgcggtgctg
gtgggcgattcggcctcgagcttcggcctgcgcaccgacgactgggccaccgcgctgccg
tccgtgccgcccggcgtgccggccacggtgctgacgcgccgcccggacgtctcggccgcg
cagaacgcggtgctgtcggcgcaggctcgtgtcggcgtggcgcaggcggcctggttcccg
gacatctcgctgaccggcgcggccggctacgcatcgcccgaaatcggcgacctgttcaag
tggtcggcccgctcgtggggcgtgggtgcgctgctctcgctgccgatcttcgacggcggc
cgccgcgaagccggcgtgcagggcgccaacgcccagctcgacggcgcgctcgcgaactac
cgcaaccaggtgctggtggcgttccaggaggtcgaagaccagctcgccgccatccgcatc
ctgcaggagcagtcggtggtgcaggcacaggccgtcacctcggcccagcgcgcgaccagc
ctgtcggacacgcgctaccgcaacggctacatcagccagctcgacctgctcgacgcccgc
cgcagcgagctgcgcaaccggcgccaggcgctgcaggtgaagtcggcacagtaccaggcg
gccgtggggctgatccgcgccattggcggcggctgggaagcgccggccgccacggcgcag
gtgcagcctggcggaacagcggcggtaaaaaccgcggcacgctga
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