Variovorax paradoxus B4: VAPA_1c30700
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Entry
VAPA_1c30700 CDS
T02835
Name
(GenBank) putative RND efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd01501
beta-Lactam resistance
vpd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VAPA_1c30700
01503 Cationic antimicrobial peptide (CAMP) resistance
VAPA_1c30700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpd03036
]
VAPA_1c30700
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c30700
01504 Antimicrobial resistance genes [BR:
vpd01504
]
VAPA_1c30700
Chromosome and associated proteins [BR:
vpd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VAPA_1c30700
Transporters [BR:
vpd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VAPA_1c30700
Antimicrobial resistance genes [BR:
vpd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VAPA_1c30700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AGU50159
UniProt:
T1XCX9
LinkDB
All DBs
Position
1:3237248..3238471
Genome browser
AA seq
407 aa
AA seq
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MKRIKRSTLAIALLALVVIAAAAVWLTRKPANEPGTPAAAAKGKAGAPAARPTLTVTVAK
AEPTELALTLAANGNVAAWQEASVGSESSGLKLAEVRVNVGDEVKKGQLLAVFSPETVRA
DIAQSRASLAEARATAADAAGNAARARTLQATGALSQQQINQYQTAEQTAKARVEAAEAV
LAAQEVRGRNTQVLAPDDGVISSRTATVGSVVAAGTELFRLIRQGRLEWRAEVTSAELSR
IAVGTTAFVVSASGAQVRGKVRSIAPTVDPQTRAALVYVDLPNVQQNTGIKAGMFARGDF
ELGRSSAPTVPQSSIVPRDGFNNVFMLLPDNRVAQLKVQTGRRVGERVEITNALPEGAQI
VVQGAGFLNDGDLVRVVAAAAPAGAGAQPAAAPAAGGQGTGETRARP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatcaaacgctctacccttgccatcgcactgctggcgctggtcgtcatcgcc
gccgcagccgtgtggctgacccgcaagcccgcgaacgaacccggcacgccggccgccgcc
gccaagggcaaggcgggtgcaccggccgctcgcccgacactgacggtcaccgtcgccaag
gccgagcccaccgagctcgcgctcacgctcgcggccaacggcaacgtggcggcctggcag
gaggccagcgtgggctccgaatccagcggcctcaagctcgccgaagtgcgcgtgaacgtg
ggcgacgaggtgaagaagggccagctgctcgccgtgttctcgcccgagacggtgcgcgcg
gacatcgcgcaatcgcgcgcctcgctcgccgaggcgagggccactgcggccgacgccgcg
ggcaacgcggcacgcgcccgcacgctgcaggccaccggcgcattgagccagcagcagatc
aaccagtaccagacggccgagcagaccgccaaggcgcgcgtcgaagctgccgaggccgtg
ctggcagcgcaggaagtgcgcggccgcaacacgcaggtgctggcgcccgacgacggggtg
atctcttcgcgcaccgccaccgtcggcagcgtggtggccgccggcaccgagctgttccgg
ctgatccgccagggccggctcgaatggcgcgccgaagtcacctcggccgagctcagccgc
attgcggtgggcaccacggccttcgtggtgagcgcgagcggcgcccaggtgcgcggcaag
gtgcgcagcatcgcacccacggtcgatccgcaaacccgtgcggcgctggtctatgtcgac
ctgcccaacgtgcagcagaacaccggcatcaaggccggcatgttcgcgcgcggcgatttc
gaactcggacgcagctcggcacccaccgtgccgcagagctccatcgttccgcgcgacggc
ttcaacaacgtcttcatgctgctgcccgacaaccgcgtggcacagctcaaggtacagacc
ggccgccgcgtcggcgagcgggtggagatcaccaatgcgctgcccgagggcgcgcagatc
gtggtgcaaggcgccggcttcctgaacgacggcgacctggttcgcgtcgtggccgcggct
gcgcccgcgggcgccggggcccagcccgccgcagcgcccgccgcaggcggccagggcacc
ggcgaaacgagggcacgcccatga
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