Variovorax paradoxus B4: VAPA_2c04990
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Entry
VAPA_2c04990 CDS
T02835
Name
(GenBank) efflux transporter, RND family
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd01501
beta-Lactam resistance
vpd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VAPA_2c04990
01503 Cationic antimicrobial peptide (CAMP) resistance
VAPA_2c04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpd03036
]
VAPA_2c04990
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_2c04990
01504 Antimicrobial resistance genes [BR:
vpd01504
]
VAPA_2c04990
Chromosome and associated proteins [BR:
vpd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VAPA_2c04990
Transporters [BR:
vpd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VAPA_2c04990
Antimicrobial resistance genes [BR:
vpd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VAPA_2c04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PYNP_C
YqfD
VanY
Motif
Other DBs
NCBI-ProteinID:
AGU53059
UniProt:
T1XL89
LinkDB
All DBs
Position
2:complement(504544..505605)
Genome browser
AA seq
353 aa
AA seq
DB search
MSKIRPLTLAALVASLALAAPARAAPETLNAVTAQPAAAAASGFDGVVEAVRQTVIAAQV
SGAVVRLDAKAGDAVKAGQVLLQIDARAADQTAAASDAQVQAARASLEVATREYERQQQL
FKKNYISRAALERAESEFKATRAQVAAQGAQAGAARTQSGLHVIRAPYAGMVADVPVSLG
DMAMPGRPLVTVYDPSALRITAAIPQTVAAQMAAGQLPRAELPGLAAQRQWVTPARMQLL
PTVDAATHTVQLRADLPAGLDGVVPGMFARLWLPSASEGSSVRPSLSVPLSAIVRRAELT
GLYVLDPQGRPLLRQVRPGRVDGDKVEILSGLMPGERVATDPQAAARFRQTTP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatccgcccactgaccctcgccgccctggtcgcttcgctcgcgctggccgcg
cccgcacgggccgcccccgagacgttgaacgcagtgacggcgcagcccgccgcggccgcc
gcatcgggcttcgacggcgtcgtcgaggcggtgcgccagaccgtgatcgccgcgcaggtg
tccggggcggtggtccggctcgacgccaaggcgggcgacgccgtcaaggccggccaggtg
ctgctgcagatcgatgccagggccgccgaccagactgccgccgccagcgacgcgcaggtc
caggccgcacgcgcatcgctggaggtcgccaccagggaatacgaacgccagcagcagctg
ttcaagaagaactacatcagccgggcggcgctcgaacgcgccgaatccgagttcaaggcg
acccgggcgcaggtcgccgcgcagggcgcccaggccggcgcggcgcgcacgcagagcggg
ctgcacgtcatccgcgcaccctacgcgggcatggtcgcggacgtgccggtgtcgctgggc
gacatggccatgccgggccggcccctggtcaccgtctacgacccgtccgcgctgcggatc
accgcggcgatcccgcagaccgtggcagcgcagatggcggcgggccagctgccccgggcc
gaactgccgggcctggctgcacagcgccagtgggtcacgccggcccgcatgcagctgctg
cccacggtcgacgcggccacgcacacggtgcagctgcgcgccgacctcccggcgggcctg
gacggcgtcgtgccgggcatgttcgcgcggctgtggctgccttcggccagcgagggttcc
agcgtgaggccgagcctgtcggtcccgctctcggcgatcgtgcgccgcgccgaactgacc
gggctctacgtgctcgatccgcagggccggccgctgcttcggcaggtgcggccgggccgc
gtcgacggcgacaaggtcgagatcctctcgggcctgatgcccggcgagcgggtggccacc
gacccgcaggccgccgcccgctttcgccagaccacgccatga
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