Variovorax paradoxus EPS: Varpa_0985
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Entry
Varpa_0985 CDS
T01392
Name
(GenBank) UDP-3-0-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00540
Lipopolysaccharide biosynthesis
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Varpa_0985
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpe01005
]
Varpa_0985
Enzymes [BR:
vpe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Varpa_0985
Lipopolysaccharide biosynthesis proteins [BR:
vpe01005
]
Lipid A
Varpa_0985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ADU35203
UniProt:
E6UUN4
LinkDB
All DBs
Position
1101504..1102493
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AA seq
329 aa
AA seq
DB search
MSIAAIARGLGRHARGAPKIPGVLQQRTLKSISRAVGVGLHSGQRVELTLRPAPADTGIV
FRRVDLPEPAEIRMTAEAVTDTRLASTVSTGGAKVQTVEHLMSACAGLGIDNLYIDITAD
EVPILDGSASSFVFLLQSAGIELQKAPRRFIRVTRKVEVREGEGANEKWASLEPYHGYKL
SFEIDFDHRVVNSTGQRVEFDLGTDSYSRDIARARTFGFTKEVEYMRSKGLALGGGLDNA
IVMDDTKVLNAGGLRYDDEFVKHKILDAMGDLYIIGKPLLAAYTAFRSGHALNNKLLREL
LANSDAYEVVTFDDEKRAPRGFGEVARAW
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgctgccatagcgaggggattaggccgccacgcgcgtggcgcgcctaaaatc
cccggcgtgctgcaacaacgaaccctcaagtcgatcagccgcgccgtgggcgtggggctt
cacagcgggcaacgcgtggaactgaccctgcgaccggccccggccgacacgggcatcgtg
ttccgccgcgtcgatctgcccgagcctgctgaaatccgaatgaccgccgaagcggtcacc
gacactcgcctcgcctccacggtctcgaccggcggcgcgaaggtgcagacggtcgagcat
ctgatgtcggcctgcgcgggcctcggcatcgacaacctctacatcgacatcacggccgac
gaagtgccgatcctcgacgggtcggcttcgtctttcgtgttcctgctgcaaagcgcgggc
atcgaactgcagaaggcgccgcgccgcttcatccgcgtgacccgcaaggtcgaggtgcgc
gaaggcgagggcgccaacgagaagtgggcgagcctggagccgtaccacggctacaagctg
agcttcgagatcgacttcgatcatcgcgtggtcaattccaccggccagcgcgtggagttc
gacctcggcaccgattcgtacagccgcgacatcgcacgtgcgcgcaccttcggcttcacg
aaagaggtcgagtacatgcgcagcaagggcttggccctgggcggcggtctcgacaacgcc
atcgtgatggacgacaccaaggtgctcaatgccggcgggctgcgctacgacgacgagttc
gtgaagcacaagatcctcgatgcgatgggcgacctctacatcatcggcaagccgctgctc
gcggcctacaccgcgttccgctcgggccatgcgctcaacaacaagctgctgcgcgaactg
ctggcgaacagcgacgcctacgaggtcgtgaccttcgacgacgagaagcgcgcaccgcgc
ggcttcggcgaagtggcgcgggcctggtag
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