Variovorax paradoxus EPS: Varpa_1351
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Entry
Varpa_1351 CDS
T01392
Name
(GenBank) short-chain dehydrogenase/reductase SDR
KO
K00059
3-oxoacyl-[acyl-carrier protein] reductase [EC:
1.1.1.100
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00061
Fatty acid biosynthesis
vpe00780
Biotin metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01212
Fatty acid metabolism
vpe01240
Biosynthesis of cofactors
Module
vpe_M00083
Fatty acid biosynthesis, elongation
vpe_M00572
Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Varpa_1351
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Varpa_1351
09110 Biosynthesis of other secondary metabolites
00333 Prodigiosin biosynthesis
Varpa_1351
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpe01004
]
Varpa_1351
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.100 3-oxoacyl-[acyl-carrier-protein] reductase
Varpa_1351
Lipid biosynthesis proteins [BR:
vpe01004
]
Fatty acid synthase
Component type
Varpa_1351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short_C2
adh_short
SDR
KR
NAD_binding_10
Epimerase
AdoHcyase_NAD
3HCDH_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ADU35567
UniProt:
E6V0G3
LinkDB
All DBs
Position
1505709..1506503
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AA seq
264 aa
AA seq
DB search
MDLGIAGKTALVCGASKGLGFGCAEALVREGVNVVIVARGAEALEAAAKKLTEAAGASGS
PFVKHVAADITTEAGRAAVFALGHDFDIVVTNAGGPPPGDFRNWDREAWIKAVDANMLTP
IELIKATVDGMAKRGFGRIVNITSSSVKSPIDILGLSNGARSGLTGFVAGVARTAVAAQG
VTINNLLPGSFETDRLKGTMAGTAQKTGQDFDTVWEARKKNIPAKRFGTPAEFGAICAFL
CSQQAGYMTGQNVLADGGAYPGTY
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggatctgggcattgcaggcaagaccgcgctggtgtgcggcgcgagcaagggactgggc
ttcggctgcgccgaggcgctggtgcgcgaaggcgtcaacgtggtgatcgtggcgcgcggc
gccgaggcgctggaagcggctgcgaagaagctcacagaggcggcgggcgcatcgggcagc
cccttcgtcaagcatgtggcggccgacatcaccaccgaagccggccgcgccgccgtgttc
gcgctgggccatgacttcgacatcgtcgtcaccaacgccggcggcccgccgcccggcgac
ttccgcaattgggaccgcgaggcgtggatcaaggcggtcgacgcgaacatgctcacgccc
atcgagctcatcaaggccacggtggacggcatggccaagcgcgggttcggccggatcgtg
aacatcacgtcgagctcggtgaagtcgcctatcgacatcctcggcctctcgaacggcgcg
cgcagcggcctcaccggcttcgtggccggcgtggcgcgcacggccgtcgcggcgcagggc
gtgaccatcaacaacctcttgcccggctccttcgagaccgaccgcctcaagggcacgatg
gccggcacggcgcagaagaccggccaggacttcgacaccgtgtgggaagcccgcaagaag
aacatccccgcgaagcgcttcggcacgccagcggagttcggcgccatctgcgcgtttctc
tgcagccagcaggccggttacatgacgggccagaacgtgctggcggacggcggcgcctac
cccggcacctactga
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