Variovorax paradoxus EPS: Varpa_1369
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Entry
Varpa_1369 CDS
T01392
Name
(GenBank) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_1369
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_1369
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_1369
Enzymes [BR:
vpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Varpa_1369
Amino acid related enzymes [BR:
vpe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Varpa_1369
Transfer RNA biogenesis [BR:
vpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Varpa_1369
Prokaryotic type
Other AARSs
Varpa_1369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
ADU35585
UniProt:
E6V0I1
LinkDB
All DBs
Position
complement(1524532..1527381)
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AA seq
949 aa
AA seq
DB search
MSDAASPTDYRSTLNLPDTPFPMRGDLPKREPGWVKEWNDEGRYHRLRDARHGAPKFILH
DGPPYANGQIHMGHAVNKILKDMITKARQLEGFDALYVPGWDCHGLPIENAIEKQFGRNL
SRDEMQAKSRAYATEQIAQQMLDFQRLGVLGEWDHPYKTMDFANEAGELRAFKRVIERGF
VYRGLKPVYWCFDCGSSLAEFEIEYADKKSQTIDVAFKAHEREKVLKAFGTDHTILGDIF
AVIWTTTAWTIPANQAINLNPEIEYSLVDTERGLLILANSLVEMCMTRYALDGKVLATVK
GEALGGLEFEHPLYDVDAGYKRLSPVYLADYATATDGTGLVHSSPAYGVDDFNSCIAHGV
AYDDILNPVQGNGSYAPDFPLFGGQNIWKAVPVIIAALRDANRLLTTETITHSYPHCWRH
KTPVIYRAAAQWFVRMDEGEGVFTKDKAPKTLRQTALDAIEQTSFYPENGKARLHDMIAG
RPDWCISRQRSWGVPIPFFLHKDSGELHPRTMEILDQAADIVEKGGIEAWSRVTTEEILG
AEDAPSYTKSTDILEVWFDSGSTFYHVLRGTHPTVHHETGPEADLYLEGHDQHRGWFHSS
LLIACALEDRAPYRGLLTHGFTVDAKGIKMSKSLKNGIDPQEISSKLGAEIIRLWVAASD
YSGDIAGDDKILARVVDSYRRIRNTLRFLMANTSDFDIAKDAVPLDQLFEIDRYALARAS
QFQAEILAHYKVYEFHPVVSKLQIYCSEDLGGFYLDILKDRLYTSAPGSLARRSAQTALW
HISQAMLRWMAPFLSFTAEEAWKFVSTGKPGESIFAETYCKFDAPDEALLAKWSRIREIR
DVVNKDIEAVRAEGKVGSSLQANLQLSAPADDFALLGTLGDDLKFVFITSAIALAAGETL
ATTVAPSTAQKCERCWHYREDVGHDAAHPTICGRCTSNLFGAGESRSFA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgctgcttcccccaccgattaccgttccacgctgaacctgcccgacaccccc
ttcccgatgcgcggcgacctgcccaagcgcgagccgggctgggtgaaggaatggaacgac
gaaggccgctaccaccgcctgcgcgacgcccgccacggcgcgcccaaattcatcctgcac
gacggccccccgtacgccaacggccagatccacatgggccacgcggtgaacaagatcctg
aaggacatgatcaccaaggcgcgccagctcgaaggcttcgacgcgctctacgtgcccggc
tgggactgccacggcctgccgatcgagaacgccatcgaaaagcagttcggccgcaacctg
agccgcgacgagatgcaggccaagagccgcgcctacgccaccgagcaaatcgcccagcag
atgctcgacttccagcgcctgggcgtgttgggcgaatgggaccatccctacaagaccatg
gatttcgccaacgaagccggcgagctgcgcgcgttcaagcgcgtgatcgagcgcggcttc
gtctaccggggcctgaagcccgtgtactggtgcttcgactgcggctcgtcgctcgctgaa
ttcgaaatcgaatacgctgacaagaagagccagaccatcgacgtcgccttcaaggcgcac
gagcgcgagaaggtgctcaaggctttcggcacagaccacacgatcctcggcgacatcttc
gcggtgatctggaccaccaccgcgtggaccatccccgccaaccaggcgatcaatctcaac
cccgagatcgagtactcgctggtcgacaccgagcgcggcctgctgatcctggccaactcg
ctggtcgagatgtgcatgacgcgttacgcgctcgacggcaaggtgctggccacggtgaag
ggcgaggcgcttggcgggctcgaattcgagcatccgctgtacgacgtggacgctggctac
aagcgcctgtcgcccgtgtacctggctgactacgctacagccaccgacggcaccggtctc
gtgcactcctcgcccgcctacggcgtggatgacttcaactcctgcatcgcgcacggcgtg
gcgtacgacgacatcctgaacccggtgcagggcaacggcagctacgcgcccgacttcccg
ctcttcggcggccagaacatctggaaagccgtgccggtgatcatcgccgcgctgcgcgac
gccaaccgcctgctgaccaccgagaccatcacccacagctacccgcactgctggcgccac
aagacgccggtgatctaccgcgcggccgcgcagtggttcgtgcgcatggacgagggcgaa
ggcgtgttcaccaaggacaaggcgcccaagacgctgcgccagacagcgctcgatgccatc
gagcaaaccagcttctacccagagaacggcaaggcgcgactgcacgacatgatcgccggt
cggcccgactggtgcatcagccgccagcgcagctggggcgtgccgatcccgttcttcctg
cacaaggattcgggcgagctgcatccgcgcaccatggaaatcctcgaccaggccgccgac
atcgtcgagaagggcggcatcgaggcctggagccgcgtgacgaccgaggaaatcctgggc
gccgaagacgcgccgagctacaccaagagcaccgacatcctggaggtgtggttcgactcg
ggctcgaccttctatcacgtgctgcgcggcacgcaccccacggtgcatcacgagacgggc
cccgaggccgacctgtacctcgaaggccatgaccagcatcgcggatggttccattcgtcg
ctgctgatcgcctgcgcgctggaagaccgcgcgccctaccgcggcctgctcacgcacggt
ttcacggtcgatgccaagggcatcaagatgagcaagtcgctcaagaacggcatcgacccg
caggaaatcagcagcaagctgggcgcggaaatcatccgcctctgggtggctgcgagcgac
tactcgggcgacatcgcgggcgacgacaagatcctcgcgcgcgtggtcgattcgtaccgc
cgcatccgcaacacgctgcgcttcctgatggctaacaccagcgacttcgacatcgccaag
gatgcggtgccgctcgaccagttgttcgagatcgaccgctacgcgctcgcgcgcgcttcg
cagttccaggccgagatccttgcgcactacaaggtgtacgagttccacccggtggtgtcc
aagctgcagatctactgctcggaagacctgggcggcttctacctcgatatcctgaaggac
cgtctctacacgagcgcgccgggctcgctcgcgcgccgcagcgcgcagacggcgctctgg
cacatctcgcaagcgatgctgcgctggatggcgccgttcctgagcttcacggccgaagag
gcgtggaagttcgtgagcaccggcaagccgggcgaatcgatcttcgccgagacgtactgc
aagttcgacgcacccgacgaagcactgctcgccaagtggagccgcatccgcgagatccgc
gacgtggtgaacaaggacatcgaagccgtgcgtgccgaaggcaaggtcggctcatcgctg
caggccaacctgcagttgagcgcaccggccgacgacttcgcgctcctcggcacgctgggc
gacgacctgaagttcgtcttcatcacctcggccatcgcgctggcggcgggcgagacgctc
gccaccaccgtcgcgccgagcaccgcgcagaagtgcgaacgctgctggcactaccgcgag
gacgtgggccacgatgcggcgcacccgacgatctgcggccgctgcacgagcaacctgttc
ggcgccggcgaatcgcggagctttgcctga
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