Variovorax paradoxus EPS: Varpa_1498
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Entry
Varpa_1498 CDS
T01392
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe01501
beta-Lactam resistance
vpe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Varpa_1498
01503 Cationic antimicrobial peptide (CAMP) resistance
Varpa_1498
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1498
01504 Antimicrobial resistance genes [BR:
vpe01504
]
Varpa_1498
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_1498
Antimicrobial resistance genes [BR:
vpe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Varpa_1498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ADU35709
UniProt:
E6V2I8
LinkDB
All DBs
Position
complement(1663185..1666364)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAQFFIDRPIFAWVLSIVVMLAGLMAIRTLPLEQYPDIAPPRVSINATYTGASAKTVEDS
VTQVIEQQMKGLDNLLYMQSTSNSSGVARLSLTFNAGTNIDVAQMQVQNKLQQAMSRLPQ
QVQSRGVTVTKGGNDFLLIVSMYSGDGSASAVDVGDYISSNLVDVISRIDGVGEVQTLGT
GYAMRLWLDPDKLRKYALMPSDVGNAITAQNAQVSAGQLGALPAGAQQQLNATITARSKL
QTVSQFENVVLRATPDGAVVRLRDVARVELGAENLTVRSQLGGRPGAGLGVVLADGANAV
QVAEAVKAKVAELQPLFPNQLQTFVSYDTTPFVSASIDEVVKALAEAMLLVVLVMYVFLQ
NFRATLIPAIAVPVVLLGTFGVLSMAGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
HEEGLSPKEATRKSMAEITPALVGIALVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMAL
SVFVALTLTPALCATLLKPVAKGQHAVARRGVLGAVDRFFAGFNRNFDKGADRYQGVVGG
IVRRGKRSLVVYLLIAAAMAVLFMRLPTSFLPDEDQAFLQVQVTLPPGASDARLQPVVTQ
MQDYFTKQPEVVSVNVITGQNGDQSSARAFVKLKDWAEREGDGQSAAALARRANKDLSTI
RDARVFVLLPPAVRGLGANAGFNFHLKDINGLGHDALVKARDQAIELLSKRSDVVVNVRS
NNLDDTPQFAVDIDDARAGAASLATADIDSTLSSAMGGTYINDFLDNGRVKRVYMQGDTA
FRMLPADIDRWSVRNSLGQMVPFPAFSSSRWTYGSPQLQRYNGSPSYEFVGDAAPGVSSG
DAMAAVDEVMKQMPAGIGYEWTGASFQERLSGAQAPVLYAISILFVFLCLAALYESWSVP
FSVILVVPLGIVGALLFTSFRGLSNDVYFQVGLLTTVGLSSKNAILIVEFAKQLQEQGKG
VIEATLEAVRLRLRPILMTSLAFGFGVLPLAIGTGAGAGGRQSIGTAVLGGMVVGTALGI
FFVPLFFALIRGWLEGRRKPAKAEVTDALPATTAEQGGH
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttcttcatcgaccgccccatcttcgcgtgggtgctctccatcgtcgtcatg
ctcgcggggttgatggcgatccgcacgctgcctctggagcaataccccgacatcgcgcca
ccgcgcgtgtcgatcaacgccacctacaccggcgcctcggccaagacggtcgaagactcg
gtcacccaggtcatcgagcaacagatgaaggggctggacaacctgctctacatgcagtcg
accagcaactcctcgggcgtggcgcgcctgtcgctcaccttcaacgcgggcaccaacatc
gacgtggcccagatgcaggtgcagaacaagctgcagcaggccatgtcgcgcctgccgcag
caggtgcaaagccgcggcgtcaccgtcaccaagggcggcaacgacttcctgctgatcgtc
tcgatgtactcgggcgacggcagcgcttccgcggtggacgtgggcgactacatcagcagc
aacctggtcgacgtgatcagccgcatcgacggcgtgggcgaggtgcagacactgggcacc
ggctacgcgatgcgcctctggctcgaccccgacaagttgcgcaagtacgcgctgatgccc
tcggatgtgggcaacgccatcaccgcgcagaacgcgcaggtctcggccggccagttgggc
gcactgcccgccggcgcgcagcagcagctcaacgccaccatcaccgcgcgcagcaagctg
cagacggtttcgcagttcgagaacgtggtgctgcgcgccacgcccgacggcgctgtggtg
cgcctgcgcgacgtggcgcgcgtcgagcttggcgccgagaacctcactgtgcgctcgcag
ctcggcggccgtcccggcgcgggcctgggcgtggtgctggccgacggcgccaacgcggtg
caggtggccgaggcggtgaaggccaaggtggccgagctgcagccgctctttccgaaccag
ctgcagaccttcgtgagctatgacaccacgcccttcgtgagcgcgtccatcgacgaggtg
gtgaaggcgctggccgaggccatgctgctggtcgtgctggtgatgtacgtctttctgcag
aacttccgcgcgacgctgatcccggccattgcggtgccggtggtgctgctgggcaccttc
ggcgtgctctccatggccggctattcgatcaacacgctcaccatgttcggcatggtgctg
gccatcggccttttggtggacgacgccatcgtggtggtggaaaacgtcgagcgcgtgatg
catgaagaaggcctctcgcccaaggaggccacgcgcaagtcgatggccgagatcacgccc
gcgctcgtgggcatcgcgctggtgctgtcggcggtgttcatcccgatggccttcttcggc
ggctcgaccggcgtgatctaccggcagttctcgatcaccatcgtctcggcgatggcgctg
tcggtgttcgtggcgctcacgctcacgccggcgctgtgcgcgacgctgctcaagcccgtg
gccaagggccagcacgcggtggcccgacgcggcgtgctgggcgcggtcgaccgcttcttc
gcgggcttcaaccgcaacttcgacaagggcgccgaccgctaccagggcgtggtgggcggc
atcgtgcggcgcggcaagcgcagccttgtggtgtacctgctgatcgcggccgcgatggcg
gtgctgttcatgcgcctgcccacctccttcctgcccgacgaggaccaggcctttttgcag
gtgcaggtgacgctgccgccgggcgcctcggacgcgcgtctgcagccggtggtcacgcag
atgcaggactacttcaccaagcaacccgaggtggtgagcgtgaacgtcatcaccgggcag
aacggcgaccagagttcggcgcgcgccttcgtgaaactcaaggactgggccgagcgcgaa
ggcgacgggcaatcggccgccgcgctcgcgcgccgcgccaacaaggacctttcgaccatc
cgcgatgcgcgcgtgttcgtgctgctgccgccggcggtgcgcgggctgggcgccaacgcg
ggcttcaacttccacctgaaggacatcaacggcctcggccacgacgcgctggtgaaggca
cgcgaccaggccatcgagctgctctccaagcgctccgacgtggtcgtgaacgtgcgcagc
aacaacctggacgacacgccgcagttcgcggtggacatcgacgatgcacgcgccggcgcg
gcgagcctcgccacggccgacatcgacagcacgctctccagcgcgatgggcggcacctac
atcaacgacttcctggacaacggccgcgtgaagcgcgtgtacatgcagggcgacaccgcc
tttcgcatgctgcccgccgacatcgatcgctggagcgttcgcaacagcctcgggcagatg
gtgccgttccccgcgttctcgagttcgcgctggacctacggctcgccgcagctgcagcgc
tacaacggcagcccgagctacgagttcgtgggcgatgccgcgccgggcgtgagctcgggc
gacgccatggccgcggtagacgaggtgatgaagcagatgcccgccggcatcggctacgaa
tggaccggcgcgtctttccaggagcggctctcgggcgcgcaggcgcctgtgctctacgcg
atctcgatcctcttcgtgttcctgtgcctcgcggcgctgtacgagagctggtcggtgccg
ttctcggtgatcctggtggtgccgctgggcatcgtgggcgcgctgctgttcaccagcttt
cggggcctgagcaacgacgtgtacttccaggtcggcctgctgacgacggtggggctctcg
tcgaagaacgcgatcctgatcgtggagttcgccaagcagttgcaggagcagggcaagggc
gtgatcgaggcgacgctggaagcggtgcgcctgcggctgcggcccatcctgatgacctcg
ctggcgttcggcttcggcgtgctgccgctggccatcggcaccggcgcgggcgcgggcggc
cgccagtcgatcggcaccgcggtgctgggcggcatggtggtgggcaccgcgctcggcatc
ttcttcgtgccgctgttcttcgcgctgatccgcgggtggctggagggaaggcgtaagccg
gcgaaggccgaagtgacggacgcattgccggcgaccaccgcggaacagggaggccactga
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