Variovorax paradoxus EPS: Varpa_1854
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Entry
Varpa_1854 CDS
T01392
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18903
outer membrane protein, multidrug efflux system
Organism
vpe
Variovorax paradoxus EPS
Module
vpe_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1854
01504 Antimicrobial resistance genes [BR:
vpe01504
]
Varpa_1854
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_1854
Antimicrobial resistance genes [BR:
vpe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
Varpa_1854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADU36064
UniProt:
E6V7Q1
LinkDB
All DBs
Position
complement(2045059..2046471)
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AA seq
470 aa
AA seq
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MRLLVIAAAALLAAGCAVGPDYKAPETPLPVSWKLEAPWRQATPNDVADKGAWWKRFNDA
QLDALQDKALAGSPTLVIANARLAQARANLDASSASRFPQLGLGARASRLKISANRPLTN
YATTNASTVQNDFALSLNASYELDLAGRVQRTVEGATASAEQSAADLANTRLVLTADVAN
NYFNLRSTDIELDVLARSIGLQRRALELVTARHDLGAVSGLDVAQQQALLETTLTQVDVL
KKQRAQYEHALATLTGTPAPSFALPVDLREIRPPAVPLGVPSEILQRRPDVASAERSMAA
ANAQIGVATAAFYPSFIISPTVGVDSRLIESLFNGPSLLWSVGVSATQVLFDGGRVRANV
DFAKAGYDATVGNYRRTVLVAMQEVEDGITGLSALDSATTQAQAAVAAARRVLDMATSRY
EGGASTYLDVITAQQSLLTVERQAAQLQGQRLLTSVFLVKALGGDWDAPA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgagactgctggtcattgccgccgcggcgctgctggccgcgggctgcgcggtcggcccc
gactacaaggcacccgagacaccgctgcccgtcagctggaagctcgaagcgccttggcgc
caggccacgcctaacgacgtggccgataagggcgcatggtggaagcgcttcaacgatgcg
cagctcgatgcgctgcaggacaaggccctcgccggcagcccgacgctggtcatcgccaac
gcgcggctcgcccaggcgcgcgccaatctcgatgcaagctcggccagccggtttccgcag
ctgggcctcggcgcccgcgcctcgcgcctgaagatttccgccaaccgtccgctcacgaac
tacgcaaccaccaacgcatcgacggtgcagaacgactttgcgctgtcgctcaacgccagc
tacgagctcgacctcgcgggccgcgtgcagcgcaccgtcgaaggcgcgacggcatcggcc
gagcaatcggccgcagacctcgcgaacacgcgcctcgtgctcaccgccgacgtggcgaac
aactacttcaacctgcgctcgaccgacatcgaactcgatgtgctcgcgcgctccatcggc
ctgcagcgccgcgcgctcgaactggtcaccgcgcggcacgacctgggcgccgtgtcgggc
ctcgacgtcgcgcagcagcaggcgctgctcgagaccacgctgacgcaggtcgatgtgctg
aagaagcagcgcgcgcagtacgagcacgcgctcgccaccctcaccggcacgcccgcgccc
agcttcgcgctgccggtggacctgcgcgagatccgcccgcccgcggtgccgctgggcgtg
ccgtccgaaatcctccagcgccggcccgacgtggcttcggccgagcggtcgatggccgcg
gccaatgcgcagatcggcgtggcaaccgcggccttctacccgagcttcatcatctcgccg
accgtgggcgtggacagccggttgatcgagtcgctgttcaacgggccgagcctgttgtgg
tcggtgggcgtgtcggccacgcaggtgctgttcgacggcgggcgcgtgcgcgcgaacgtc
gatttcgccaaggccggctatgacgccaccgtgggcaactaccgccgcacggtgctcgtc
gcgatgcaggaagtggaagacggcatcaccggcctttccgcgctcgacagcgccaccacg
caggcgcaggccgccgttgccgccgcgcgccgggtgctcgacatggcgaccagccgctac
gaaggcggcgcatcgacgtacctcgatgtgatcaccgcgcagcagtcgctgctgaccgtc
gagcggcaggctgcgcaactgcaaggccagcgcttgctgacctctgtgtttctcgtgaag
gcgctcggcggcgactgggacgcgccggcctga
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