Variovorax paradoxus EPS: Varpa_3230
Help
Entry
Varpa_3230 CDS
T01392
Name
(GenBank) short-chain dehydrogenase/reductase SDR
KO
K00059
3-oxoacyl-[acyl-carrier protein] reductase [EC:
1.1.1.100
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00061
Fatty acid biosynthesis
vpe00780
Biotin metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01212
Fatty acid metabolism
vpe01240
Biosynthesis of cofactors
Module
vpe_M00083
Fatty acid biosynthesis, elongation
vpe_M00572
Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Varpa_3230
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Varpa_3230
09110 Biosynthesis of other secondary metabolites
00333 Prodigiosin biosynthesis
Varpa_3230
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpe01004
]
Varpa_3230
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.100 3-oxoacyl-[acyl-carrier-protein] reductase
Varpa_3230
Lipid biosynthesis proteins [BR:
vpe01004
]
Fatty acid synthase
Component type
Varpa_3230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short_C2
adh_short
KR
Epimerase
THF_DHG_CYH_C
F420_oxidored
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ADU37416
UniProt:
E6VA32
LinkDB
All DBs
Position
complement(3480586..3481317)
Genome browser
AA seq
243 aa
AA seq
DB search
MSLEGKRALITGASGALGAAMAERFARDGATVLLHANSRPEAVEQLAASITAAGGKAECH
VFDLRSDEASAAACTRILEGGPVQILVNNAGVHDDAVLPGMRADQWHKVIDVSLNGFFRV
TQPLLLPMMRTRWGRILNISSVSAITGNRGQVNYAAAKGALNSATKALSLEVASRGVTVN
AIAPGIITSPMADAVFDPAVINQMVPVKRAGTPQEVAALASFLASDEAAYITGQVISING
GMI
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgaaggaaaacgcgcactgatcacgggcgccagcggcgcactcggcgcggcc
atggccgaacgatttgcgcgggacggcgcaacggtgctgctgcatgccaactcgcggccg
gaagcggtcgagcaattggccgcatcgatcacggcggcgggcggcaaggcggaatgccat
gtgttcgacctgcgcagcgatgaggcctcggcggccgcgtgcacgcgcatcctggaaggc
gggccggtccagatcctcgtcaacaacgccggcgtgcacgacgacgcggtgctgccgggc
atgcgcgccgatcagtggcacaaggtgatcgacgtgtcgctcaacggcttcttccgcgtg
acgcagccgttgctgctgccgatgatgcgcacgcgctgggggcgcatcctgaacatctcg
tcggtgtcggcgatcacgggcaaccgggggcaggtgaactacgccgcggccaagggcgcg
ctcaacagcgcgaccaaggcgctgtcgctcgaagtggcgtcgcgcggcgtgacggtcaat
gcgatcgcgccggggatcatcacgtcgccgatggcggatgcggtgttcgatcccgcggtc
atcaaccagatggtgccggtgaaacgggcgggaacgccgcaggaagtggccgcgctggcg
tcgttcctggccagcgacgaagcggcctacatcaccgggcaggtgatctcgatcaacggc
gggatgatctga
DBGET
integrated database retrieval system
