Variovorax paradoxus EPS: Varpa_3359
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Entry
Varpa_3359 CDS
T01392
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18903
outer membrane protein, multidrug efflux system
Organism
vpe
Variovorax paradoxus EPS
Module
vpe_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3359
01504 Antimicrobial resistance genes [BR:
vpe01504
]
Varpa_3359
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_3359
Antimicrobial resistance genes [BR:
vpe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
Varpa_3359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADU37544
UniProt:
E6UV32
LinkDB
All DBs
Position
complement(3617379..3618860)
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AA seq
493 aa
AA seq
DB search
MKFAFQPWVRGALLPLVAALALAGCATVPSGVPEIQTTAQFKEQGATPPAGFTKALPSEA
QARGAWWLAFNDPVLNALVEKADVNNNNIQGAAARLAEARALARSANADRLPQIGLGAGA
NRGGGLDKASASVRPGTMTNIGATFSYEVDLFGRLSGASNAAKLDAAGREGLLQSTRLAV
QAEVAQTYLQLRALDAERALMRETVEAYSDTLRLTQRRQAAGDIAELDVARVQTEVSSTE
SDALALDRQRAQVEHALAVLVGDSASSFGVRTDEWATALPAIPPGVPGTVLTRRPDVSAA
QNAVLAAQARVGVAQTAWFPDISLTGAAGYASPEIGDLFKWSARSWGVGALLSLPIFDGG
RREAGVQGANAQLDGALASYRTQVLVAFQEVEDQLAAIRILQEQSVVQAKAVSSAQRATS
LSDTRYRNGYISQLDLLDARRSELRNRRQALQVKSAQYQAAVGLIRAIGGTWEVPAATAS
AASATATQKVATR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgcattccaaccttgggtccgcggcgccttgctgccgctggttgcagccctg
gcactggccggctgcgccactgtgccttcgggcgtgccggagatccagaccacggcgcag
ttcaaggagcagggcgccacgccgcccgccggcttcacgaaggcgctgccttccgaggcg
caggcacgcggcgcctggtggctggcgttcaacgacccggtgctcaatgcgctggtcgag
aaggccgacgtcaacaacaacaacatccagggcgcagcggcgcggctggccgaggcccgc
gcgctggcgcgcagtgccaacgccgaccggctgccgcagatcggcctgggcgctggcgcc
aaccgtggcgggggcctggacaaggcttcggccagcgtcaggccgggcacgatgaccaac
atcggcgccacgttctcttatgaggtcgacctgttcggccgcctctcgggcgccagcaac
gcggccaagctcgacgccgccggccgcgaaggcctgctgcagagcacgcggctcgcggtg
caggccgaagtggcgcagacctacctgcaactgcgcgcgctcgacgccgaacgcgcactg
atgcgcgaaacggtcgaggcctacagcgacacgctgcgcctgacgcagcgccgccaggcg
gccggcgacatcgccgagctcgacgtggcgcgggtgcagaccgaggtgtcgtccaccgaa
tcggatgcgctggcgctcgaccgccaacgcgcccaggtcgagcatgcgctcgcggtgctg
gtgggcgattcggcctccagcttcggtgtgcgcaccgacgagtgggcgacggcgctgcct
gccattccgcccggcgttcccggcacggtgctcacgcgccggcccgacgtgtcggcggcg
cagaacgcggtacttgcggcgcaggcccgcgtgggcgtggcgcaaaccgcgtggttcccg
gacatctcgctgaccggcgcggccggctacgcttcgcccgagatcggcgacctcttcaag
tggtcggcccgctcgtggggcgtgggcgcgctgctgtcgctgccgatcttcgacggcggc
cgccgcgaggccggcgtgcagggcgccaacgcccagctcgacggcgcgctcgccagctat
cgcacgcaggtgctggtggcgttccaggaggtcgaagaccagctggccgcgatccgcatc
ctgcaggagcagtcggtggtgcaggccaaggcggtgtcgtcggcccagcgggcgacgagc
ctgtcggacacgcgctaccgcaacggctacatcagccagctcgacctgctcgacgcacgc
cgcagcgaactgcgcaaccggcgccaggcgctgcaggtgaagtcggcgcagtaccaggcg
gctgtgggcctgatccgcgcgataggcggtacgtgggaagtgccggcggcaaccgcttcg
gctgcatcggctacagcgacgcagaaggtggcgacgcgctga
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