Variovorax paradoxus EPS: Varpa_3451
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Entry
Varpa_3451 CDS
T01392
Name
(GenBank) acriflavin resistance protein
KO
K18138
multidrug efflux pump
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe01501
beta-Lactam resistance
vpe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Varpa_3451
01503 Cationic antimicrobial peptide (CAMP) resistance
Varpa_3451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_3451
01504 Antimicrobial resistance genes [BR:
vpe01504
]
Varpa_3451
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_3451
Antimicrobial resistance genes [BR:
vpe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Varpa_3451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
ADU37636
UniProt:
E6UW64
LinkDB
All DBs
Position
3718999..3722139
Genome browser
AA seq
1046 aa
AA seq
DB search
MNVSAWSIRNPIPAVMLFVLLTFGGLLSFNAMKVQNFPDIDLPTVTVSALLPGAAPSQLE
TDVARKLENSIATVQGLKHITTKVQDGAATLIVEFRLEKPVQEAVDDVRSAVQRVRADLP
ADVRDPVVTKLDLAGQPVLAFTIASTQMDAEALSWYVDNDVTKKLLALPGVGAVNRVGGV
TRQVHIDLDPGKLQALGASAADISRQLRQVQVESAGGRFDLGGSEQPVRTLATVQSADQL
NDIQIVLSDGRRVRLDQVARISDTIAEPRSGALLNGKPVVGFEVARSRGASEVEVGHAIQ
KALGEMRAQRPDIELTEAFNFVDPVEEEYNGSLHLLYEGAILAVIVVWLFLRDWRATFVS
AVALPMSVIPAFIGMFVLGFSVNVISLLALSLVVGILVDDAIVEVENIVRHLRMGKTPYQ
AAMEAADEIGLAVIATTFTLIAVFLPTAFMSGVAGKFFKQFGWTASLAVFASLVVARVLT
PMMAAYILKPIVGEEKEPGWLRWYMRAVEWSTHNRFKTMVLATLFFFGSLAMIPLLKTGF
IPPDDNSQTQIYLSLAPGSTLAQTTAAAEETRNRVMKIDHVKSVYTTVAGGSAGGDPFAS
FGTPETRKATLTIKLDERGDRPRKQVIENQIRTALETLPGVRSTVGLGGSGEKYILALTG
EDPVALATAASAVEKDLRTIAGLGNITSTASLIRPEIAVRPDFARAADLGVTSAAIAETL
RVATLGDYDQSLAKLNLAQRQVPIVVKLEDSARKDLDLLGRLSVPGARGPVMLSQVASLT
MEGGPAVIDRYDRSRNVNFEIELSSVGLGDAKTAVMALPSIQKLPPGVRVTEVGDAEVMT
ELFASFGLAMLTGVLCIYIVLVLLFKDFLHPVTILCALPLALGGAFVGLLIGQKALSMPS
LIGLIMLMGIATKNSILLVEYAIVARRDHGMSRWDALRDACHKRARPIIMTTLAMGAGML
PIAVGFGAADSSFRSPMAMAVIGGLITSTVLSLLVVPAVFTYIDDIEHWIRRTVRRLRGQ
PADPHIDDDLRENPADDGGTPARTSA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtttccgcctggtccatacgcaacccgattccggcggtgatgctgttcgtgctg
ctcaccttcggtgggctgctgtcgttcaacgcgatgaaggtgcagaactttccggacatc
gacctgccgaccgtcacggtctcggcgttgctgcccggtgccgcgccttcgcagcttgaa
accgacgtcgcgcgcaagctcgagaactccatcgccaccgtgcagggcctgaagcacatc
accaccaaggtgcaggacggcgccgccacgctgatcgtcgagttccgcctcgaaaagccc
gtgcaggaagccgtggacgacgtgcgctccgcggtgcagcgcgtgcgcgccgacctgccc
gccgacgtgcgcgacccggtggtcaccaagctcgacctggcgggccagccggtgctggcc
ttcaccatcgcctcgacgcagatggacgccgaggcactgagctggtacgtggacaacgac
gtcaccaagaagctgctcgcgctgcccggcgtgggcgcggtgaaccgcgtgggcggcgtc
acgcgccaggtgcacatcgacctggaccccggcaagctgcaggcgctgggcgcctcggcc
gccgacatctcgcgccagctgcgccaggtgcaggtggaaagcgcgggtggccgcttcgac
ctgggcggcagcgaacagccggtgcgcacgctcgccaccgtgcagtcggccgaccagttg
aacgacatccagatcgtgctgtccgacggccgtcgcgtgcggctcgatcaggtggcgcgc
atcagcgacaccatcgccgagccgcgctcgggcgccttgctcaacggcaagccggtggtg
ggcttcgaggtggcccgcagccgcggcgccagcgaagtggaagtgggccacgcgatacag
aaggcgttgggcgagatgcgtgcgcagcgccccgacatcgagctgaccgaagccttcaac
ttcgtcgacccggtggaagaggaatacaacggctcgctgcacctgctgtacgaaggcgcc
atcctggcggtgatcgtggtgtggctcttcttgcgcgactggcgcgcgacttttgtctcg
gccgtggcgctgccgatgtcggtgatcccggcgttcatcggcatgttcgtgctgggcttc
tcggtcaacgtcatctcgctgctcgcgctctcgctggtggtcgggatattggtggacgac
gcgatcgtggaggtcgagaacatcgtgcggcacctgcgcatgggcaagacgccctaccag
gcagcgatggaggcggccgacgaaatcggcctggcggtgatcgccaccaccttcacgctg
atcgcggtgttcctgcccacggccttcatgagcggcgtggccggcaagttcttcaagcag
ttcggctggacggcctcgctcgcggtgttcgcctcgctggtggtcgcgcgggtgctcacg
ccgatgatggcggcctacatcctgaagcccatcgtcggtgaagaaaaagagcccggctgg
ctgcgctggtacatgcgcgccgtggaatggagcacccacaaccgcttcaagacgatggtg
ctggccaccctcttcttcttcggctcgctcgcgatgatcccgctgctcaagaccggcttc
attccgccggatgacaactcgcagacgcagatctacctgtcgctcgcgccgggttccacg
ctcgcgcagaccacggccgcggccgaggaaacgcgcaaccgcgtgatgaagatcgaccac
gtgaagagcgtctacacgacggtggccggcggcagcgcgggcggcgatccgttcgcgagc
ttcggcacgcccgagacgcgcaaggccacgctcaccatcaagctggacgagcgcggcgac
cggccgcgcaagcaggtgatcgagaaccagattcgcaccgccctggaaaccctgcccggc
gtgcgcagcaccgtgggcctgggcggctcgggcgagaagtacatcctggcgctcaccggc
gaagacccggtggcgctggcaaccgccgccagcgcggtcgaaaaagacctgcgcaccatc
gcgggcctgggcaacatcacctccaccgcgagcctgatccgccccgagatcgccgtgcgc
cccgacttcgcgcgcgccgccgacctgggcgtgaccagcgccgccattgccgagacgctg
cgcgtggccacgctgggcgactacgaccagtcgctcgccaagctcaacctcgcgcagcgg
caggtgccgatcgtggtgaagctggaagactcggcgcgcaaggacctcgacctgctcggc
cgcctctcggtgcccggcgcacgcggccccgtcatgctgagccaggtggcctcgctcacg
atggaaggcggcccggccgtcatcgaccgttacgaccgatcgcgcaacgtcaacttcgag
atcgaactctccagcgtgggcctgggcgatgcgaagaccgcggtgatggcgctgccctcg
atccagaagctgccgcccggcgtgcgcgtgaccgaagtgggcgatgcggaagtgatgacc
gagctcttcgcaagcttcggcctcgcgatgctcaccggcgtgctgtgcatctacatcgtg
ctggtgctgctcttcaaggatttcctgcacccggtgaccatcctgtgcgcgctgccgctc
gcgctgggcggcgcgttcgtgggcttgctgatcgggcagaaggcgctgtcgatgccctcg
ctgatcggactcatcatgctgatgggcatcgcgacgaagaactcgatcctgctggtggag
tacgccatcgtggcgcgccgcgaccacggcatgagccgctgggacgcgctgcgcgacgcc
tgccacaagcgggcgcggcccatcatcatgaccacgctcgccatgggcgccggcatgctg
ccgatcgccgtgggcttcggcgccgcagactccagcttccgctcgccgatggcgatggcg
gtgatcggcgggctgatcacctcgacggtgctgagcctcttggtggtgccggcggtgttc
acctacatcgacgacatcgagcactggatacggcgcaccgtgcgcaggctgcgtgggcag
ccggccgatccgcacatcgacgacgacctgcgagaaaacccggccgacgacggcggcaca
ccggctcggaccagcgcctga
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