Variovorax paradoxus EPS: Varpa_3730
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Entry
Varpa_3730 CDS
T01392
Name
(GenBank) 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00010
Glycolysis / Gluconeogenesis
vpe00020
Citrate cycle (TCA cycle)
vpe00620
Pyruvate metabolism
vpe00785
Lipoic acid metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
vpe01210
2-Oxocarboxylic acid metabolism
Module
vpe_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Varpa_3730
00020 Citrate cycle (TCA cycle)
Varpa_3730
00620 Pyruvate metabolism
Varpa_3730
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Varpa_3730
Enzymes [BR:
vpe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Varpa_3730
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
ADU37914
UniProt:
E6V0W8
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All DBs
Position
complement(4023884..4026613)
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AA seq
909 aa
AA seq
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MSANPENLFGSAANDADAQETREWMDALSSVIQSEGPERAHFLLEQLLEHARQHSIDKPF
SANTAYVNTIEPDQEERCPGNLEIEERLRAYMRWNAMAMVVKANRHHPPEGGDLGGHIGS
FASLANMFGAGFNHFWHAESENHGGDCLYIQGHVSPGIYARAYLEGRLTEEQLLNFRQEV
DGKGLSSYPHPKLMPEFWQFPTVSMGLGPLMAIYQARFLKYLHARGIANTENRKVWVFCG
DGEMDEVESMGAIGLAAREGLDNLVFVINCNLQRLDGPVRGNGKIIQELEGEFRGSGWNV
IKLIWGSGWDQLIARDKEGALRKIMMETNDGDYQSFKANDGAYVRKHFFGRDPRTLEMVA
KMSDDDIWQLRRGGHDSQKVYAAFDAAVKHKGQPTVLLIKTVKGFGMGKIGEGKNNVHQT
KKLSDEDIMAFRDRFNIPIPDSQIADLPFYKPADDTPEMKYLHERRKALGGYLPHRRTKA
DESFTVPSLETFKSVMEPTAEGREISTTQAYVRFLTQLLRDKALGPRVVPILVDEARTFG
MEGLFRQIGIYNPAGQQYTPVDKDQVMYYKEDKAGQILQEGINEAGGMSSWIAAATSYST
NNRIMVPFYVYYSMFGFQRIGDLAWAAGDMQARGFLLGGTSGRTTLNGEGLQHEDGHSHI
LANTIPNCVSYDPTFAHEVGVILHHGLKRMVEKQDNVYYYLTLLNENYAMPGLQPGTEEQ
IIKGMYLSKQGPVVKAAKGSKEAPTVQLLGSGTILRESFAAQELLEKDWGVSASVWSCPS
FNELTRDGQDADRWNLLHPDQTPRVPFVAEQLAPTTGPVVASTDYMKAYAEQIRPFIPKG
RTYKVLGTDGFGRSDFRNKLREHFEINRHYIVVAALKALSEDGTVPVAKVVEAIKKYGIN
VDKVNPLYA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaatcccgagaacctgttcggctcggccgcaaacgatgcggacgcccaggag
acccgtgaatggatggatgcactgtcctccgtcatccagagcgagggtccggagcgggcc
cacttccttctcgagcagctgctcgaacatgcccggcagcacagcatcgacaagccgttc
tctgccaacaccgcctacgtcaacaccatcgagcccgatcaggaagagcgttgccccggc
aacctcgagatcgaggagcgcctgcgcgcctacatgcgttggaacgcgatggcgatggtg
gtcaaggccaaccgtcaccatccccctgaaggcggcgacctcggcggccacatcggctcc
ttcgcctcgctggcgaacatgttcggcgccggcttcaaccacttctggcacgccgagagc
gaaaaccacggcggcgactgcctctacatccagggccacgtctcccccggcatttacgcc
cgcgcctaccttgaaggccgcctgaccgaagagcaactgctcaacttccgccaggaagtg
gacggcaagggtctctccagctacccgcatccgaagctgatgcccgagttctggcagttc
cccacggtgtcgatgggcctcggaccgctgatggccatctaccaggctcgtttcctcaag
tacctgcatgcccgcggcatcgccaacaccgagaaccgcaaggtctgggtgttctgcggc
gacggcgaaatggacgaagtcgaatcgatgggcgccatcggcctcgcagcgcgcgaaggc
ctggacaaccttgtcttcgtcatcaactgcaacctgcagcgcctggacggcccggtgcgc
ggcaacggcaagatcatccaggaactggaaggcgaattccgcggctcgggctggaacgtc
atcaagctgatctggggcagcggctgggaccagttgatagcacgcgacaaggaaggggcc
ctccgcaagatcatgatggagacgaacgacggcgactaccagtcgttcaaggccaacgac
ggtgcctacgtacgcaagcacttcttcggccgcgatccgcgcacgctggagatggtcgcc
aagatgagcgacgacgacatctggcagctgcgccgcggcggccacgactcgcagaaggtc
tacgcggccttcgacgcggccgtcaagcacaagggccagcccacggtgctcctgatcaag
acggtcaagggcttcgggatgggcaagatcggtgagggcaagaacaacgtccaccagacc
aagaagctgagcgacgaggacatcatggccttccgcgaccgcttcaacatcccgatcccg
gacagccagatcgccgacctgccgttctacaagccggctgacgacaccccggaaatgaag
tacctgcacgagcgccgcaaggccctgggcggttacctgccgcaccgccgcaccaaggcc
gacgagagcttcacggtgccctcgctcgagactttcaagtcggtgatggaacccacggcc
gaaggccgtgagatctcgacgacgcaggcctacgttcgcttcctcacgcagctcctgcgc
gacaaggcgctcggtccgcgcgtggtgcccatcctggtggacgaagcccgcaccttcggc
atggaagggttgttccgccagatcggcatctacaaccccgcaggccagcagtacaccccg
gtcgataaagaccaggtcatgtactacaaggaagacaaggccggccagatcctgcaggaa
ggcatcaacgaggccggcggcatgtccagctggatcgcggcggccacctcgtacagcacg
aacaaccgcatcatggtgccgttctacgtgtactactcgatgttcggcttccagcgcatc
ggcgacctggcctgggcggccggcgacatgcaggcgcgcggcttccttctgggcggcacc
tcggggcgcactacgctcaacggcgaaggcctgcagcacgaagacggtcacagccacatc
ctggccaacaccatcccgaactgcgtgagctacgacccgaccttcgcgcacgaagtcggc
gtgatcctgcaccatggcttgaagcgcatggtcgagaagcaggacaacgtctattactac
ctgacgctgctgaacgagaactacgcgatgccaggcctgcagcccggcaccgaagagcag
atcatcaagggcatgtacctgtccaagcaggggccggtggtcaaggccgccaagggcagc
aaggaagcgccgaccgtgcaactgctcggtagcggcaccatcctgcgcgagagcttcgcg
gcgcaagagctgctcgagaaggactggggcgtgtcggcttccgtgtggagctgcccgagc
ttcaacgagctcacccgcgacggccaggacgccgaccgctggaacctgctgcaccccgac
cagaccccgcgcgtgcccttcgtggccgagcaactcgcgcccacgaccggcccggtggtc
gcatcgaccgactacatgaaggcctatgcggaacagatccgccccttcattccgaagggc
cgcacctacaaggtgctgggcaccgacggtttcggccgcagcgacttccgcaacaagctg
cgcgaacacttcgagatcaatcgtcactacatcgtggtggccgcgctcaaggcgctgagc
gaagatggcaccgtgccggtggccaaggtggtggaagcgatcaagaagtacggcatcaat
gtcgacaaggtcaacccgctctacgcttga
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