Variovorax paradoxus EPS: Varpa_4027
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Entry
Varpa_4027 CDS
T01392
Name
(GenBank) triosephosphate isomerase
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00010
Glycolysis / Gluconeogenesis
vpe00051
Fructose and mannose metabolism
vpe00562
Inositol phosphate metabolism
vpe00710
Carbon fixation by Calvin cycle
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
vpe01230
Biosynthesis of amino acids
Module
vpe_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
vpe_M00002
Glycolysis, core module involving three-carbon compounds
vpe_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Varpa_4027
00051 Fructose and mannose metabolism
Varpa_4027
00562 Inositol phosphate metabolism
Varpa_4027
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Varpa_4027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpe04147
]
Varpa_4027
Enzymes [BR:
vpe01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
Varpa_4027
Exosome [BR:
vpe04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
Varpa_4027
Exosomal proteins of bladder cancer cells
Varpa_4027
Exosomal proteins of melanoma cells
Varpa_4027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
Motif
Other DBs
NCBI-ProteinID:
ADU38199
UniProt:
E6V518
LinkDB
All DBs
Position
complement(4343575..4344363)
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AA seq
262 aa
AA seq
DB search
MVTTTNNAMTTKKKLIAGNWKMNGGLAVNEALVKALQQGLAASPAACDVALCAPAPYFAQ
LQSLLAGTPSLALGAQDVSAHPQGAFTGEQSAAMLKDFGVRYAIVGHSERRQYHGETDET
VAAKAAAALANGITPIVCVGETLAEREAGQTEEVVKRQLAAVIHVNGHCISEIVVAYEPV
WAIGTGKTASPEQAQAVHAVLRAQLHHAASEHAAGISILYGGSMNAANAAELLAQADIDG
GLIGGASLKAPDFLQIISATAR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaacgacgaacaacgcgatgacaaccaagaagaaactgatcgccggcaactgg
aagatgaatggcggcctggctgtaaacgaggcgctggtgaaggctctgcagcaagggctg
gccgcaagcccggctgcttgcgatgtcgcgctgtgcgcgccggcgccgtatttcgcccag
ctgcaatcgctgttggcgggcacgccgtcgctggcgctcggtgcgcaggacgtttcggcg
catccgcaaggcgcgtttactggcgagcaatcggcggcaatgctgaaggatttcggggtg
cgctatgccatcgtcggccattccgaacgtcggcagtaccacggcgaaaccgacgagacg
gtggctgcgaaggcggctgccgcattggccaatggcatcacgccgatcgtttgcgtcggc
gagacgctggccgagcgcgaagcagggcagaccgaagaagtcgtcaagcgccagctggca
gcggtgatccatgtgaatggccactgcatcagcgaaatcgttgtggcttacgagccggtc
tgggccatcggcaccggcaagacggcttcgccagagcaagcgcaggcagtgcatgccgtg
ctgcgtgcgcagttgcatcacgcagcgagcgagcacgctgccggcatcagcattctttac
ggcggcagcatgaacgcggccaatgccgccgaactgctggcgcaggccgacatcgatggc
ggcctcatcggtggtgcatcgctcaaggcccccgactttctgcagatcatttctgccact
gcgcgctga
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