Variovorax paradoxus EPS: Varpa_4273
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Entry
Varpa_4273 CDS
T01392
Name
(GenBank) PAS/PAC sensor signal transduction histidine kinase
KO
K07315
phosphoserine phosphatase RsbU/P [EC:
3.1.3.3
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpe03021
]
Varpa_4273
Enzymes [BR:
vpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.3 phosphoserine phosphatase
Varpa_4273
Transcription machinery [BR:
vpe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Varpa_4273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS
PAS_9
HATPase_c_2
PAS_4
PAS_8
DUF4164
LinB-like_C
Motif
Other DBs
NCBI-ProteinID:
ADU38442
UniProt:
E6V890
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All DBs
Position
complement(4598258..4599391)
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AA seq
377 aa
AA seq
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MSPPLPELADLFEEAPCGLLVTALDGTILKVNATFCGWVGFAREELVGLKRVQDLFTMGG
RIFHQTHWAPALQLQGSLAEVKFEVRHRDGQGIPMILNARRRKREAGEFDEIAAFVAEDR
NRYERELMSARKKADALLQVERDTQHLLRDRALFAEQMVGIVSHDLRNPLSAILMGIQLL
GRTEGERQVRVLGHVRNSAERAQRLIEELLDFTQSRIGKGLSVKPGATDLHAIAAQAIDE
LMLAYPATRIVHLQSGPGACIADTDRLAQLIGNLVSNAVAYGHRGTPVTVRSETNGPKAT
VVVHNEGDPIPPDMLATVFEPMVRGATEGSSERSVGLGLFIVNEIAKAHGGAMEVTSSSV
GGTVFTLQFPTHHQRAD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgccccttcccgaactggccgacctcttcgaagaagcgccttgcggcctgctg
gtcacggcgctggacggcacgatcctcaaggtcaacgccaccttctgcggctgggtcggc
ttcgcacgcgaagagctcgtcggcctgaagcgcgtgcaagacctgttcacgatgggcggc
cgcatcttccatcagacccactgggcgccggccctgcagcttcagggctcgctggccgag
gtgaagttcgaggtccggcatcgcgatggccagggcattccgatgattctcaacgcgcgt
cggcgcaagcgcgaagcgggcgaattcgacgagatcgccgccttcgtggcggaagaccgc
aaccgctacgagcgcgagctcatgagcgcgcgcaagaaggcagacgccttgctgcaggtg
gagcgcgacacgcagcatctgttgagagaccgtgcgctcttcgccgagcagatggtgggc
atcgtgagccacgatctgcgcaatccgctgtcggcgatcctcatgggcatccagttgctg
gggcggacggaaggcgagcgccaggttcgcgtgctgggccatgtgcgcaactcggccgag
cgcgcgcagcgcctgatcgaggaactgctggacttcacccaatcgcgcatcggcaagggc
ttgagcgtgaagccgggcgccaccgacctgcatgcgatcgcggcgcaagcgatcgacgag
ttgatgcttgcctatccggcgacaagaatcgttcatttgcagagcggaccgggcgcgtgc
attgccgatacggatcggctggcgcagctcatcggcaacctcgtgagcaacgccgtggcc
tacggccatcgcggcacgcccgtcaccgtgcgttcggaaacaaacgggccgaaagccacg
gtggtggtgcacaacgaaggcgacccgatcccgcccgacatgctcgccacggtgttcgag
ccgatggtgcggggcgcgaccgaaggaagttcggagcgcagcgtcggcctcggccttttc
atcgtgaacgagatcgcgaaggcgcacggcggcgcgatggaggtgacgtcctcttctgtc
ggcggcaccgtgttcacgctgcaatttcccacgcaccaccagcgcgctgactag
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