Variovorax paradoxus EPS: Varpa_4762
Help
Entry
Varpa_4762 CDS
T01392
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00790
Folate biosynthesis
vpe01100
Metabolic pathways
Module
vpe_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Varpa_4762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_4762
Enzymes [BR:
vpe01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Varpa_4762
Transfer RNA biogenesis [BR:
vpe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Varpa_4762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
zf-WIZ
Motif
Other DBs
NCBI-ProteinID:
ADU38923
UniProt:
E6UYM0
LinkDB
All DBs
Position
5184739..5185377
Genome browser
AA seq
212 aa
AA seq
DB search
MTYSVKEIFYTLQGEGGQAGMPAVFCRFAGCNLWTGREEDRASAVCRFCDTDFVGTDGTL
GGKFKTADQLADTIAAQWPANDAEHRLVVLTGGEPLLQVDAALVDALHARRFRIAVESNG
TVAAPEGIDWLCISPKAGAPWVQQRGQELKLVWPQTAFDLDAMARTGDFTHRFLQPMDGP
DRVANTELCIAECMRQPAWRLSVQTHKITGIR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacctacagcgtcaaggaaatcttctacacactgcagggcgaaggaggtcaggcgggc
atgccggccgtgttctgccgctttgccgggtgcaacctctggacgggccgcgaggaagac
cgcgccagtgccgtctgccgtttctgcgacaccgatttcgtcggcaccgacggcacgctg
ggcggcaagttcaagaccgccgaccagctcgccgacaccatcgccgcgcagtggcccgcc
aacgatgccgagcaccggctggtggtgttgaccggcggcgaaccgctgctgcaggtggat
gccgcgctggtcgatgcgctgcatgcgcggcgctttcgcatcgcagtcgaaagcaacggc
acggtcgcagcgcccgaaggcatcgactggctctgcatcagccccaaggccggcgcgcca
tgggtgcagcagcgcgggcaggagctcaagctggtgtggccgcagaccgcgttcgacctc
gatgcgatggcgcgcaccggcgacttcacgcatcgctttctgcaaccgatggacggcccc
gaccgcgtggccaataccgaactctgcatcgccgaatgcatgcgtcagccggcctggcgc
ctcagcgtgcagacccacaagatcaccggaatcaggtag
DBGET
integrated database retrieval system
